Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP9P55211 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP9P55211 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP9P55211 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP9P55211 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.65■□□□□ 0.74
CASP9P55211 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CASP9P55211 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP9P55211 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CASP9P55211 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CASP9P55211 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CASP9P55211 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
CASP9P55211 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CASP9P55211 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CASP9P55211 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CASP9P55211 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP9P55211 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.65■□□□□ 0.74
CASP9P55211 MIR6084-201ENST00000622012 110 ntBASIC19.65■□□□□ 0.74
CASP9P55211 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASP9P55211 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.65■□□□□ 0.74
CASP9P55211 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASP9P55211 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP9P55211 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP9P55211 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
CASP9P55211 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CASP9P55211 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CASP9P55211 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP9P55211 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP9P55211 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP9P55211 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP9P55211 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASP9P55211 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP9P55211 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASP9P55211 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.64■□□□□ 0.73
CASP9P55211 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CASP9P55211 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.63■□□□□ 0.73
CASP9P55211 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP9P55211 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.63■□□□□ 0.73
CASP9P55211 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP9P55211 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.63■□□□□ 0.73
CASP9P55211 AC142381.2-201ENST00000566120 298 ntBASIC19.63■□□□□ 0.73
CASP9P55211 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP9P55211 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP9P55211 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CASP9P55211 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP9P55211 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.62■□□□□ 0.73
CASP9P55211 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.62■□□□□ 0.73
CASP9P55211 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.62■□□□□ 0.73
CASP9P55211 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP9P55211 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP9P55211 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CASP9P55211 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP9P55211 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.61■□□□□ 0.73
CASP9P55211 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.61■□□□□ 0.73
CASP9P55211 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.61■□□□□ 0.73
CASP9P55211 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP9P55211 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.61■□□□□ 0.73
CASP9P55211 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP9P55211 FEM1AP1-201ENST00000431297 1995 ntBASIC19.61■□□□□ 0.73
CASP9P55211 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CASP9P55211 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP9P55211 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CASP9P55211 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CASP9P55211 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP9P55211 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP9P55211 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP9P55211 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP9P55211 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP9P55211 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms