Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
MDH1P40925 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 KRT18P60-201ENST00000312876 1297 ntBASIC20.95■□□□□ 0.94
MDH1P40925 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 TNXA-203ENST00000507684 2038 ntBASIC20.95■□□□□ 0.94
MDH1P40925 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MDH1P40925 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.95■□□□□ 0.94
MDH1P40925 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.95■□□□□ 0.94
MDH1P40925 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
MDH1P40925 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
MDH1P40925 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.94■□□□□ 0.94
MDH1P40925 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
MDH1P40925 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MDH1P40925 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.94■□□□□ 0.94
MDH1P40925 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
MDH1P40925 PVT1_1.1-201ENST00000615125 194 ntBASIC20.94■□□□□ 0.94
MDH1P40925 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
MDH1P40925 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.94■□□□□ 0.94
MDH1P40925 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MDH1P40925 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
MDH1P40925 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MDH1P40925 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.93■□□□□ 0.94
MDH1P40925 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.93■□□□□ 0.94
MDH1P40925 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.93■□□□□ 0.94
MDH1P40925 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.93■□□□□ 0.94
MDH1P40925 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MDH1P40925 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MDH1P40925 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
MDH1P40925 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.93■□□□□ 0.94
MDH1P40925 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MDH1P40925 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MDH1P40925 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.92■□□□□ 0.94
MDH1P40925 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MDH1P40925 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.92■□□□□ 0.94
MDH1P40925 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.92■□□□□ 0.94
MDH1P40925 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.92■□□□□ 0.94
MDH1P40925 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MDH1P40925 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MDH1P40925 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MDH1P40925 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MDH1P40925 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 AC004408.2-201ENST00000623613 2777 ntBASIC20.91■□□□□ 0.94
MDH1P40925 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.91■□□□□ 0.94
MDH1P40925 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.91■□□□□ 0.94
MDH1P40925 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MDH1P40925 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
MDH1P40925 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.91■□□□□ 0.94
MDH1P40925 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.91■□□□□ 0.94
MDH1P40925 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.91■□□□□ 0.94
MDH1P40925 DUX4L18-201ENST00000553347 1267 ntBASIC20.91■□□□□ 0.94
MDH1P40925 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.91■□□□□ 0.94
MDH1P40925 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.9■□□□□ 0.94
MDH1P40925 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
MDH1P40925 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 TCF3P1-201ENST00000423021 1937 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms