Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SOX6P35712 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SOX6P35712 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.65■□□□□ 0.58
SOX6P35712 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SOX6P35712 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.65■□□□□ 0.58
SOX6P35712 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX6P35712 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
SOX6P35712 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.65■□□□□ 0.58
SOX6P35712 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SOX6P35712 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SOX6P35712 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
SOX6P35712 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX6P35712 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX6P35712 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX6P35712 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 AC120024.1-201ENST00000562672 995 ntBASIC18.64■□□□□ 0.57
SOX6P35712 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SOX6P35712 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX6P35712 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SOX6P35712 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SOX6P35712 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX6P35712 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.64■□□□□ 0.57
SOX6P35712 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SOX6P35712 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.63■□□□□ 0.57
SOX6P35712 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
SOX6P35712 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SOX6P35712 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX6P35712 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SOX6P35712 AC090340.1-201ENST00000620778 4980 ntBASIC18.63■□□□□ 0.57
SOX6P35712 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SOX6P35712 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX6P35712 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.63■□□□□ 0.57
SOX6P35712 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SOX6P35712 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX6P35712 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.62■□□□□ 0.57
SOX6P35712 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.62■□□□□ 0.57
SOX6P35712 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX6P35712 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX6P35712 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SOX6P35712 AC103834.1-201ENST00000520383 144 ntBASIC18.62■□□□□ 0.57
SOX6P35712 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX6P35712 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
SOX6P35712 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.62■□□□□ 0.57
SOX6P35712 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX6P35712 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SOX6P35712 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX6P35712 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SOX6P35712 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SOX6P35712 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.62■□□□□ 0.57
SOX6P35712 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SOX6P35712 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX6P35712 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.61■□□□□ 0.57
SOX6P35712 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
SOX6P35712 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.61■□□□□ 0.57
SOX6P35712 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.61■□□□□ 0.57
SOX6P35712 MIR4281-201ENST00000580852 62 ntBASIC18.61■□□□□ 0.57
SOX6P35712 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.61■□□□□ 0.57
SOX6P35712 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SOX6P35712 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SOX6P35712 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SOX6P35712 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX6P35712 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SOX6P35712 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SOX6P35712 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SOX6P35712 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms