Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.25■□□□□ 0.83
EPHA3P29320 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.25■□□□□ 0.83
EPHA3P29320 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EPHA3P29320 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
EPHA3P29320 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.83
EPHA3P29320 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.25■□□□□ 0.83
EPHA3P29320 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 MIR4466-201ENST00000606121 54 ntBASIC20.25■□□□□ 0.83
EPHA3P29320 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
EPHA3P29320 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 AC007225.1-201ENST00000566331 1836 ntBASIC20.25■□□□□ 0.83
EPHA3P29320 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA3P29320 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.25■□□□□ 0.83
EPHA3P29320 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.24■□□□□ 0.83
EPHA3P29320 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
EPHA3P29320 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
EPHA3P29320 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.24■□□□□ 0.83
EPHA3P29320 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
EPHA3P29320 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EPHA3P29320 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHA3P29320 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.24■□□□□ 0.83
EPHA3P29320 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.24■□□□□ 0.83
EPHA3P29320 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHA3P29320 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA3P29320 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA3P29320 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
EPHA3P29320 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHA3P29320 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EPHA3P29320 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
EPHA3P29320 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.23■□□□□ 0.83
EPHA3P29320 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA3P29320 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.23■□□□□ 0.83
EPHA3P29320 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
EPHA3P29320 AC020907.5-201ENST00000624372 1936 ntBASIC20.23■□□□□ 0.83
EPHA3P29320 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA3P29320 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
EPHA3P29320 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EPHA3P29320 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA3P29320 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHA3P29320 AC112907.3-201ENST00000577781 2400 ntBASIC20.22■□□□□ 0.83
EPHA3P29320 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHA3P29320 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHA3P29320 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
EPHA3P29320 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHA3P29320 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
EPHA3P29320 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA3P29320 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHA3P29320 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
EPHA3P29320 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
EPHA3P29320 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHA3P29320 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
EPHA3P29320 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHA3P29320 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.21■□□□□ 0.83
EPHA3P29320 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.21■□□□□ 0.83
EPHA3P29320 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHA3P29320 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
EPHA3P29320 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
EPHA3P29320 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
EPHA3P29320 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms