Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.55■□□□□ 0.88
GFRA3O60609 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.55■□□□□ 0.88
GFRA3O60609 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GFRA3O60609 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GFRA3O60609 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.54■□□□□ 0.88
GFRA3O60609 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.54■□□□□ 0.88
GFRA3O60609 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.54■□□□□ 0.88
GFRA3O60609 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.54■□□□□ 0.88
GFRA3O60609 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
GFRA3O60609 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
GFRA3O60609 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
GFRA3O60609 LINC00543-201ENST00000567234 1845 ntBASIC20.54■□□□□ 0.88
GFRA3O60609 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GFRA3O60609 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GFRA3O60609 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GFRA3O60609 AC145676.1-201ENST00000514988 2004 ntBASIC20.53■□□□□ 0.88
GFRA3O60609 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GFRA3O60609 SLC25A3P1-201ENST00000443844 931 ntBASIC20.53■□□□□ 0.88
GFRA3O60609 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.53■□□□□ 0.88
GFRA3O60609 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GFRA3O60609 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GFRA3O60609 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GFRA3O60609 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GFRA3O60609 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GFRA3O60609 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.53■□□□□ 0.88
GFRA3O60609 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GFRA3O60609 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GFRA3O60609 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.52■□□□□ 0.88
GFRA3O60609 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GFRA3O60609 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GFRA3O60609 RBM17P1-201ENST00000453646 1190 ntBASIC20.52■□□□□ 0.88
GFRA3O60609 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.52■□□□□ 0.88
GFRA3O60609 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GFRA3O60609 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GFRA3O60609 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GFRA3O60609 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
GFRA3O60609 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.52■□□□□ 0.88
GFRA3O60609 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
GFRA3O60609 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GFRA3O60609 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GFRA3O60609 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GFRA3O60609 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.51■□□□□ 0.87
GFRA3O60609 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GFRA3O60609 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GFRA3O60609 MIR1238-201ENST00000408483 83 ntBASIC20.51■□□□□ 0.87
GFRA3O60609 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.51■□□□□ 0.87
GFRA3O60609 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GFRA3O60609 NAPSB-206ENST00000562112 1266 ntBASIC20.51■□□□□ 0.87
GFRA3O60609 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GFRA3O60609 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GFRA3O60609 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.51■□□□□ 0.87
GFRA3O60609 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GFRA3O60609 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.51■□□□□ 0.87
GFRA3O60609 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GFRA3O60609 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GFRA3O60609 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.5■□□□□ 0.87
GFRA3O60609 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.5■□□□□ 0.87
GFRA3O60609 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 UNC93B2-201ENST00000285383 730 ntBASIC20.5■□□□□ 0.87
GFRA3O60609 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.5■□□□□ 0.87
GFRA3O60609 AL450487.1-201ENST00000426799 995 ntBASIC20.5■□□□□ 0.87
GFRA3O60609 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.5■□□□□ 0.87
GFRA3O60609 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.5■□□□□ 0.87
GFRA3O60609 AP000525.1-201ENST00000608286 694 ntBASIC20.5■□□□□ 0.87
GFRA3O60609 AC120498.8-201ENST00000614275 531 ntBASIC20.5■□□□□ 0.87
GFRA3O60609 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GFRA3O60609 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
GFRA3O60609 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.49■□□□□ 0.87
GFRA3O60609 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.49■□□□□ 0.87
GFRA3O60609 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GFRA3O60609 CRYGFP-201ENST00000418459 633 ntBASIC20.49■□□□□ 0.87
GFRA3O60609 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.49■□□□□ 0.87
GFRA3O60609 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.49■□□□□ 0.87
GFRA3O60609 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
GFRA3O60609 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.49■□□□□ 0.87
GFRA3O60609 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms