Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.72■■□□□ 1.07
MSI1O43347 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSI1O43347 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSI1O43347 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MSI1O43347 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSI1O43347 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSI1O43347 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSI1O43347 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSI1O43347 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSI1O43347 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
MSI1O43347 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSI1O43347 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSI1O43347 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.71■■□□□ 1.07
MSI1O43347 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.71■■□□□ 1.07
MSI1O43347 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.71■■□□□ 1.07
MSI1O43347 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.71■■□□□ 1.07
MSI1O43347 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MSI1O43347 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
MSI1O43347 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.71■■□□□ 1.07
MSI1O43347 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSI1O43347 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MSI1O43347 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
MSI1O43347 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSI1O43347 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.7■■□□□ 1.06
MSI1O43347 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSI1O43347 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.7■■□□□ 1.06
MSI1O43347 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MSI1O43347 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MSI1O43347 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.7■■□□□ 1.06
MSI1O43347 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.7■■□□□ 1.06
MSI1O43347 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
MSI1O43347 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.7■■□□□ 1.06
MSI1O43347 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MSI1O43347 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSI1O43347 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
MSI1O43347 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MSI1O43347 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
MSI1O43347 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.69■■□□□ 1.06
MSI1O43347 AC245052.3-201ENST00000450182 901 ntBASIC21.69■■□□□ 1.06
MSI1O43347 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
MSI1O43347 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.69■■□□□ 1.06
MSI1O43347 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.69■■□□□ 1.06
MSI1O43347 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSI1O43347 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
MSI1O43347 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.68■■□□□ 1.06
MSI1O43347 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.68■■□□□ 1.06
MSI1O43347 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 AC243732.1-201ENST00000612648 864 ntBASIC21.68■■□□□ 1.06
MSI1O43347 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.68■■□□□ 1.06
MSI1O43347 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.68■■□□□ 1.06
MSI1O43347 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 AC068338.2-201ENST00000563278 1430 ntBASIC21.68■■□□□ 1.06
MSI1O43347 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSI1O43347 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.68■■□□□ 1.06
MSI1O43347 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.68■■□□□ 1.06
MSI1O43347 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSI1O43347 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.67■■□□□ 1.06
MSI1O43347 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.67■■□□□ 1.06
MSI1O43347 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.67■■□□□ 1.06
MSI1O43347 CYP2T1P-201ENST00000432607 1285 ntBASIC21.67■■□□□ 1.06
MSI1O43347 AC007322.4-201ENST00000509611 723 ntBASIC21.67■■□□□ 1.06
MSI1O43347 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.67■■□□□ 1.06
MSI1O43347 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.67■■□□□ 1.06
MSI1O43347 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.67■■□□□ 1.06
MSI1O43347 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.67■■□□□ 1.06
MSI1O43347 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSI1O43347 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.67■■□□□ 1.06
MSI1O43347 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MSI1O43347 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MSI1O43347 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.66■■□□□ 1.06
MSI1O43347 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MSI1O43347 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MSI1O43347 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.66■■□□□ 1.06
MSI1O43347 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MSI1O43347 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
MSI1O43347 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MSI1O43347 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSI1O43347 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MSI1O43347 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MSI1O43347 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms