Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AL162377.1-201ENST00000618844 1793 ntBASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 AC239859.2-201ENST00000444165 318 ntBASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DUXBA0A1W2PPF3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 AC010525.1-201ENST00000585559 441 ntBASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DUXBA0A1W2PPF3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.98■□□□□ 0.31
DUXBA0A1W2PPF3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUXBA0A1W2PPF3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUXBA0A1W2PPF3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms