Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 HSPB3-201ENST00000302005 784 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AL031229.1-201ENST00000404273 224 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 SNORA77.1-201ENST00000408156 125 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 MED20-203ENST00000409060 815 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AL512635.1-201ENST00000414056 832 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AL033527.2-201ENST00000418255 785 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC145543.1-201ENST00000424770 586 ntTSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AL772155.1-201ENST00000431077 347 ntTSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC084851.3-201ENST00000432771 573 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC074121.1-201ENST00000441836 348 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AL662795.1-201ENST00000448756 634 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 ASS1P12-201ENST00000452496 1227 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 THAP6-210ENST00000507557 542 ntTSL 4 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 HNRNPA1P76-201ENST00000529475 848 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 C12orf73-203ENST00000546540 590 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 RN7SL155P-201ENST00000581538 263 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC080112.1-201ENST00000583752 487 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC008687.3-201ENST00000599209 598 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 Metazoa_SRP.206-201ENST00000612004 332 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 RFPL3-AS1_1.2-201ENST00000618747 88 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 LINC00282-201ENST00000626362 654 ntAPPRIS P5 TSL 4 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC027369.1-201ENST00000640698 1105 ntTSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 SRP14-AS1-201ENST00000504245 2317 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 RRM2-212ENST00000615152 3434 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 SLC22A6-201ENST00000360421 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 EDRF1-202ENST00000356792 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 OXNAD1-209ENST00000627468 3983 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 SLC3A1-201ENST00000260649 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 ADAMTSL3-205ENST00000567476 6873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 TCF4-236ENST00000567880 1948 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 PIGN-202ENST00000400334 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 BCAS3-217ENST00000588462 3559 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 MYO7A-203ENST00000409893 4050 ntTSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 LRRN2-202ENST00000367176 3211 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 TNIP3-204ENST00000509841 1575 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 CD4-201ENST00000011653 3114 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 BOLL-202ENST00000321801 3135 ntAPPRIS P4 TSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 STIL-202ENST00000360380 5225 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 LINC01238-203ENST00000429456 2170 ntTSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AC096636.1-201ENST00000625140 3618 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 OLFML1-203ENST00000528758 1438 ntTSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 DDR1-240ENST00000454612 3942 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 BMP15-201ENST00000252677 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 GDF3-201ENST00000329913 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 PMS2P6-201ENST00000333674 710 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AC211476.3-201ENST00000380410 715 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 LINC01946-201ENST00000416279 418 ntTSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 OR14L1P-201ENST00000419087 918 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 KRTAP8-3P-201ENST00000423658 188 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 RN7SL666P-201ENST00000460953 304 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 RN7SL250P-201ENST00000475154 258 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 USP32P2-204ENST00000508093 1174 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 TPT1P5-201ENST00000511433 521 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AC009996.1-201ENST00000558006 653 ntTSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AC027088.3-201ENST00000559495 872 ntTSL 3 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AC129492.4-201ENST00000581248 465 ntTSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AC005392.2-201ENST00000595748 301 ntTSL 3 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AC073254.1-210ENST00000597495 635 ntTSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 AL117339.1-203ENST00000638066 888 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 KF456110.1-201ENST00000641105 385 ntBASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 CD9-201ENST00000009180 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 LINC00885-201ENST00000457079 1828 ntTSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 INSC-203ENST00000424273 2943 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 DAW1-201ENST00000309931 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 C15orf32-202ENST00000624458 1749 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 CSF3R-205ENST00000373106 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 LSM3-201ENST00000306024 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 KCNE1B-203ENST00000622690 3149 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 HHAT-201ENST00000261458 3594 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SYCE2Q6PIF2 ATF3-211ENST00000613954 2031 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 NEFM-202ENST00000433454 2519 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 ARHGEF34P-201ENST00000483587 4532 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms