RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
SREK1-202ENST00000334121 EHMT2Q96KQ7 1210 aa18.77■□□□□ 0.59
SREK1-202ENST00000334121 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
SREK1-202ENST00000334121 SHROOM4Q9ULL8 1493 aa18.24■□□□□ 0.51
SREK1-202ENST00000334121 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
SREK1-202ENST00000334121 RANGAP1P46060 587 aaPredicted RBP17.81■□□□□ 0.44
SREK1-202ENST00000334121 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
SREK1-202ENST00000334121 APLP2Q06481 763 aa17.63■□□□□ 0.41
SREK1-202ENST00000334121 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
SREK1-202ENST00000334121 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
SREK1-202ENST00000334121 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
SREK1-202ENST00000334121 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
SREK1-202ENST00000334121 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
SREK1-202ENST00000334121 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.32
SREK1-202ENST00000334121 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
SREK1-202ENST00000334121 YTHDC1Q96MU7 727 aaKnown RBP17.01■□□□□ 0.31
SREK1-202ENST00000334121 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
SREK1-202ENST00000334121 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
SREK1-202ENST00000334121 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
SREK1-202ENST00000334121 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.31
SREK1-202ENST00000334121 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
SREK1-202ENST00000334121 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
SREK1-202ENST00000334121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
SREK1-202ENST00000334121 ITGAEP38570 1179 aa16.79■□□□□ 0.28
SREK1-202ENST00000334121 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
SREK1-202ENST00000334121 MYT1Q01538 1121 aa16.75■□□□□ 0.27
SREK1-202ENST00000334121 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
SREK1-202ENST00000334121 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
SREK1-202ENST00000334121 NEFLP07196 543 aa16.64■□□□□ 0.25
SREK1-202ENST00000334121 DAXXQ9UER7 740 aaPredicted RBP16.39■□□□□ 0.21
SREK1-202ENST00000334121 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
SREK1-202ENST00000334121 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
SREK1-202ENST00000334121 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
SREK1-202ENST00000334121 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
SREK1-202ENST00000334121 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
SREK1-202ENST00000334121 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
SREK1-202ENST00000334121 FAM50AQ14320 339 aaKnown RBP16.11■□□□□ 0.17
SREK1-202ENST00000334121 FBLN2P98095 1184 aa16.1■□□□□ 0.17
SREK1-202ENST00000334121 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
SREK1-202ENST00000334121 BCANQ96GW7 911 aa16.07■□□□□ 0.16
SREK1-202ENST00000334121 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
SREK1-202ENST00000334121 NEUROD1Q13562 356 aa16.05■□□□□ 0.16
SREK1-202ENST00000334121 ARID3CA6NKF2 412 aa16.05■□□□□ 0.16
SREK1-202ENST00000334121 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.162e-9■□□□□ 8.9
SREK1-202ENST00000334121 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
SREK1-202ENST00000334121 TRIM26Q12899 539 aaPredicted RBP16■□□□□ 0.15
SREK1-202ENST00000334121 HRCP23327 699 aa15.96■□□□□ 0.15
SREK1-202ENST00000334121 P3H3Q8IVL6 736 aa15.81■□□□□ 0.12
SREK1-202ENST00000334121 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.12
SREK1-202ENST00000334121 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
SREK1-202ENST00000334121 ZBTB47Q9UFB7 747 aaPredicted RBP15.76■□□□□ 0.11
SREK1-202ENST00000334121 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
SREK1-202ENST00000334121 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
SREK1-202ENST00000334121 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
SREK1-202ENST00000334121 ZNF777Q9ULD5 760 aaPredicted RBP15.71■□□□□ 0.11
SREK1-202ENST00000334121 ABCC9O60706 1549 aa15.67■□□□□ 0.1
SREK1-202ENST00000334121 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
SREK1-202ENST00000334121 A0A0G2JS52 829 aa15.64■□□□□ 0.09
SREK1-202ENST00000334121 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
SREK1-202ENST00000334121 ESF1Q9H501 851 aaKnown RBP15.56■□□□□ 0.08
SREK1-202ENST00000334121 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
SREK1-202ENST00000334121 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
SREK1-202ENST00000334121 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
SREK1-202ENST00000334121 ANP32CO43423 234 aa15.54■□□□□ 0.08
SREK1-202ENST00000334121 NEFMP07197 916 aa15.54■□□□□ 0.08
SREK1-202ENST00000334121 ZBTB7CA1YPR0 619 aa15.48■□□□□ 0.07
SREK1-202ENST00000334121 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
SREK1-202ENST00000334121 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
SREK1-202ENST00000334121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.063e-7■■□□□ 13.6
SREK1-202ENST00000334121 ARXQ96QS3 562 aa15.37■□□□□ 0.05
SREK1-202ENST00000334121 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
SREK1-202ENST00000334121 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
SREK1-202ENST00000334121 HSP90AA1P07900 732 aaKnown RBP15.3■□□□□ 0.04
SREK1-202ENST00000334121 CHIC2Q9UKJ5 165 aa15.29■□□□□ 0.04
SREK1-202ENST00000334121 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
SREK1-202ENST00000334121 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
SREK1-202ENST00000334121 TULP1O00294 542 aaPredicted RBP15.26■□□□□ 0.03
SREK1-202ENST00000334121 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
SREK1-202ENST00000334121 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
SREK1-202ENST00000334121 HIRIP3Q9BW71 556 aaPredicted RBP15.19■□□□□ 0.02
SREK1-202ENST00000334121 ANP32AP39687 249 aaKnown RBP15.18■□□□□ 0.02
SREK1-202ENST00000334121 TPRNQ4KMQ1 711 aa15.16■□□□□ 0.02
SREK1-202ENST00000334121 TAOK2Q9UL54 1235 aa15.15■□□□□ 0.02
SREK1-202ENST00000334121 FKBP8Q14318 412 aa15.15■□□□□ 0.02
SREK1-202ENST00000334121 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
SREK1-202ENST00000334121 IRX6P78412 446 aaPredicted RBP15.13■□□□□ 0.01
SREK1-202ENST00000334121 HNRNPUQ00839 825 aaKnown RBP eCLIP15.13■□□□□ 0.01
SREK1-202ENST00000334121 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
SREK1-202ENST00000334121 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
SREK1-202ENST00000334121 NBR1Q14596 966 aa15.11■□□□□ 0.01
SREK1-202ENST00000334121 ARID4BQ4LE39 1312 aaPredicted RBP15.08■□□□□ 0
SREK1-202ENST00000334121 ANP32BQ92688 251 aaKnown RBP15.05■□□□□ 0
SREK1-202ENST00000334121 TONSLQ96HA7 1378 aa15.04■□□□□ -0
SREK1-202ENST00000334121 LMOD2Q6P5Q4 547 aa15.04■□□□□ -0
SREK1-202ENST00000334121 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
SREK1-202ENST00000334121 TMC1Q8TDI8 760 aa15.03■□□□□ -0
SREK1-202ENST00000334121 PPP1R15AO75807 674 aaPredicted RBP15.02□□□□□ -0.01
SREK1-202ENST00000334121 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.016e-7■■□□□ 12.2
SREK1-202ENST00000334121 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
SREK1-202ENST00000334121 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms