RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
SLC3A1-201ENST00000260649 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
SLC3A1-201ENST00000260649 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
SLC3A1-201ENST00000260649 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
SLC3A1-201ENST00000260649 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.79
SLC3A1-201ENST00000260649 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
SLC3A1-201ENST00000260649 DCAF1Q9Y4B6 1507 aa19.32■□□□□ 0.68
SLC3A1-201ENST00000260649 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
SLC3A1-201ENST00000260649 ABCC9O60706 1549 aa19.12■□□□□ 0.65
SLC3A1-201ENST00000260649 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
SLC3A1-201ENST00000260649 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
SLC3A1-201ENST00000260649 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
SLC3A1-201ENST00000260649 LOC105371045A0A1W2PR82 267 aa18.76■□□□□ 0.59
SLC3A1-201ENST00000260649 NACADO15069 1562 aa18.71■□□□□ 0.59
SLC3A1-201ENST00000260649 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
SLC3A1-201ENST00000260649 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
SLC3A1-201ENST00000260649 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
SLC3A1-201ENST00000260649 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
SLC3A1-201ENST00000260649 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
SLC3A1-201ENST00000260649 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
SLC3A1-201ENST00000260649 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
SLC3A1-201ENST00000260649 WIZO95785 1651 aa18.42■□□□□ 0.54
SLC3A1-201ENST00000260649 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
SLC3A1-201ENST00000260649 HRCP23327 699 aa18.3■□□□□ 0.52
SLC3A1-201ENST00000260649 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
SLC3A1-201ENST00000260649 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
SLC3A1-201ENST00000260649 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
SLC3A1-201ENST00000260649 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
SLC3A1-201ENST00000260649 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
SLC3A1-201ENST00000260649 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
SLC3A1-201ENST00000260649 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
SLC3A1-201ENST00000260649 ABCC8Q09428 1581 aa18.02■□□□□ 0.47
SLC3A1-201ENST00000260649 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
SLC3A1-201ENST00000260649 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
SLC3A1-201ENST00000260649 EIF4G1Q04637 1599 aaKnown RBP17.94■□□□□ 0.46
SLC3A1-201ENST00000260649 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
SLC3A1-201ENST00000260649 SOGA1O94964 1423 aa17.82■□□□□ 0.44
SLC3A1-201ENST00000260649 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
SLC3A1-201ENST00000260649 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
SLC3A1-201ENST00000260649 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
SLC3A1-201ENST00000260649 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
SLC3A1-201ENST00000260649 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
SLC3A1-201ENST00000260649 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
SLC3A1-201ENST00000260649 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
SLC3A1-201ENST00000260649 RANGAP1P46060 587 aaPredicted RBP17.62■□□□□ 0.41
SLC3A1-201ENST00000260649 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
SLC3A1-201ENST00000260649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
SLC3A1-201ENST00000260649 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
SLC3A1-201ENST00000260649 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
SLC3A1-201ENST00000260649 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
SLC3A1-201ENST00000260649 EEA1Q15075 1411 aa17.51■□□□□ 0.39
SLC3A1-201ENST00000260649 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
SLC3A1-201ENST00000260649 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
SLC3A1-201ENST00000260649 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
SLC3A1-201ENST00000260649 RAPGEF2Q9Y4G8 1499 aa17.36■□□□□ 0.37
SLC3A1-201ENST00000260649 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
SLC3A1-201ENST00000260649 CLIP1P30622 1438 aa17.34■□□□□ 0.37
SLC3A1-201ENST00000260649 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
SLC3A1-201ENST00000260649 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
SLC3A1-201ENST00000260649 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
SLC3A1-201ENST00000260649 KIF21BO75037 1637 aa17.28■□□□□ 0.36
SLC3A1-201ENST00000260649 APLP2Q06481 763 aa17.27■□□□□ 0.36
SLC3A1-201ENST00000260649 CUX1P39880 1505 aa17.23■□□□□ 0.35
SLC3A1-201ENST00000260649 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
SLC3A1-201ENST00000260649 CFTRP13569 1480 aa17.19■□□□□ 0.34
SLC3A1-201ENST00000260649 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
SLC3A1-201ENST00000260649 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
SLC3A1-201ENST00000260649 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
SLC3A1-201ENST00000260649 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
SLC3A1-201ENST00000260649 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
SLC3A1-201ENST00000260649 CUX2O14529 1486 aa17.06■□□□□ 0.32
SLC3A1-201ENST00000260649 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
SLC3A1-201ENST00000260649 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
SLC3A1-201ENST00000260649 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
SLC3A1-201ENST00000260649 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
SLC3A1-201ENST00000260649 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
SLC3A1-201ENST00000260649 IGF1RP08069 1367 aa16.98■□□□□ 0.31
SLC3A1-201ENST00000260649 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
SLC3A1-201ENST00000260649 ITGAEP38570 1179 aa16.97■□□□□ 0.31
SLC3A1-201ENST00000260649 NESP48681 1621 aa16.96■□□□□ 0.31
SLC3A1-201ENST00000260649 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
SLC3A1-201ENST00000260649 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
SLC3A1-201ENST00000260649 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
SLC3A1-201ENST00000260649 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
SLC3A1-201ENST00000260649 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
SLC3A1-201ENST00000260649 ARHGAP35Q9NRY4 1499 aa16.92■□□□□ 0.3
SLC3A1-201ENST00000260649 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
SLC3A1-201ENST00000260649 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
SLC3A1-201ENST00000260649 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
SLC3A1-201ENST00000260649 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
SLC3A1-201ENST00000260649 POLA1P09884 1462 aaPredicted RBP16.79■□□□□ 0.28
SLC3A1-201ENST00000260649 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
SLC3A1-201ENST00000260649 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
SLC3A1-201ENST00000260649 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
SLC3A1-201ENST00000260649 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
SLC3A1-201ENST00000260649 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
SLC3A1-201ENST00000260649 FAM50AQ14320 339 aaKnown RBP16.73■□□□□ 0.27
SLC3A1-201ENST00000260649 FHOD3Q2V2M9 1422 aa16.73■□□□□ 0.27
SLC3A1-201ENST00000260649 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
SLC3A1-201ENST00000260649 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms