Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 AC106739.1-201ENST00000617035 715 ntBASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TUBB1Q9H4B7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TUBB1Q9H4B7 PKD1P6-201ENST00000343738 4769 ntBASIC20.14■□□□□ 0.82
TUBB1Q9H4B7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 AC027702.1-201ENST00000563810 1770 ntBASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 MIR572-201ENST00000384983 95 ntBASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TUBB1Q9H4B7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 AC008406.3-201ENST00000620001 1374 ntBASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBB1Q9H4B7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 EDA-201ENST00000338901 1233 ntBASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 MIR939-201ENST00000401314 82 ntBASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 AL031432.3-201ENST00000607698 485 ntBASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 AC110285.6-201ENST00000617652 491 ntBASIC20.12■□□□□ 0.81
TUBB1Q9H4B7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms