Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 AP001330.3-201ENST00000520123 633 ntBASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 AC142381.2-201ENST00000566120 298 ntBASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML1Q8N9V2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 AC073314.1-201ENST00000568729 2216 ntBASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIML1Q8N9V2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 ZNRF2P3-201ENST00000424200 374 ntBASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 EEF1DP3-203ENST00000566025 782 ntBASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 AC053503.5-201ENST00000601508 636 ntBASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 RASA4CP-201ENST00000424092 1398 ntBASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.24■■□□□ 1.31
TRIML1Q8N9V2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.23■■□□□ 1.31
TRIML1Q8N9V2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 AL355001.2-201ENST00000620617 1191 ntBASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIML1Q8N9V2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 AC092667.1-201ENST00000434301 2586 ntBASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 MIR939-201ENST00000401314 82 ntBASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 AC007225.1-201ENST00000566331 1836 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms