Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL13A1Q5TAT6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL13A1Q5TAT6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL13A1Q5TAT6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL13A1Q5TAT6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 AK4P3-201ENST00000418260 669 ntBASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 AC063952.2-201ENST00000498792 1227 ntBASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 LINC01238-205ENST00000567549 1107 ntBASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL13A1Q5TAT6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 AL390955.1-201ENST00000428694 934 ntBASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL13A1Q5TAT6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 AC100791.3-201ENST00000617619 330 ntBASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.97■■□□□ 1.43
COL13A1Q5TAT6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 ATP5G1P1-201ENST00000448724 379 ntBASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 AC243732.1-201ENST00000612648 864 ntBASIC23.96■■□□□ 1.43
COL13A1Q5TAT6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.95■■□□□ 1.43
COL13A1Q5TAT6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 AC008175.2-201ENST00000612840 297 ntBASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL13A1Q5TAT6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 AC012313.10-201ENST00000623509 926 ntBASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 AC139426.1-201ENST00000568218 2529 ntBASIC23.94■■□□□ 1.42
COL13A1Q5TAT6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 REXO1L10P-201ENST00000615707 1290 ntBASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.93■■□□□ 1.42
COL13A1Q5TAT6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms