Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 BAG6-241ENST00000428326 1051 ntTSL 59.53□□□□□ -0.888e-8■■■■□ 24.3
SUB1P53999 BAG6-242ENST00000433828 902 ntTSL 28.1□□□□□ -1.118e-8■■■■□ 24.3
SUB1P53999 INSIG1-205ENST00000468307 852 ntTSL 53.62□□□□□ -1.832e-6■■■■□ 24.3
SUB1P53999 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.642e-6■■■■□ 24.3
SUB1P53999 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.482e-6■■■■□ 24.3
SUB1P53999 TMEM9-211ENST00000497582 1075 ntTSL 316.6■□□□□ 0.252e-8■■■■□ 24.3
SUB1P53999 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.042e-8■■■■□ 24.3
SUB1P53999 TMEM9-206ENST00000435310 507 ntTSL 211.29□□□□□ -0.62e-8■■■■□ 24.3
SUB1P53999 TMEM9-205ENST00000414605 545 ntTSL 28.35□□□□□ -1.072e-8■■■■□ 24.3
SUB1P53999 TMEM9-207ENST00000455367 487 ntTSL 58.11□□□□□ -1.112e-8■■■■□ 24.3
SUB1P53999 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.48■□□□□ 0.072e-9■■■■□ 24.3
SUB1P53999 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.132e-9■■■■□ 24.3
SUB1P53999 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.492e-9■■■■□ 24.3
SUB1P53999 NDUFA10-212ENST00000485344 4509 ntTSL 210.55□□□□□ -0.722e-9■■■■□ 24.3
SUB1P53999 NDUFA10-206ENST00000419408 662 ntTSL 58.49□□□□□ -1.052e-9■■■■□ 24.3
SUB1P53999 NDUFA10-210ENST00000471378 582 ntTSL 37.53□□□□□ -1.22e-9■■■■□ 24.3
SUB1P53999 NDUFA10-211ENST00000476216 817 ntTSL 26.81□□□□□ -1.322e-9■■■■□ 24.3
SUB1P53999 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.362e-6■■■■□ 24.2
SUB1P53999 POLR2K-202ENST00000519765 1021 ntTSL 55.38□□□□□ -1.552e-6■■■■□ 24.2
SUB1P53999 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.571e-7■■■■□ 24.2
SUB1P53999 PRDX3-203ENST00000494433 2277 ntTSL 1 (best)7.05□□□□□ -1.284e-7■■■■□ 24.2
SUB1P53999 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.444e-7■■■■□ 24.2
SUB1P53999 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.194e-7■■■■□ 24.2
SUB1P53999 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.68e-8■■■■□ 24.2
SUB1P53999 EIF3F-205ENST00000531329 1072 ntTSL 29.68□□□□□ -0.868e-8■■■■□ 24.2
SUB1P53999 EIF3F-204ENST00000530219 2110 ntTSL 28.85□□□□□ -0.998e-8■■■■□ 24.2
SUB1P53999 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.068e-8■■■■□ 24.2
SUB1P53999 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.96□□□□□ -1.624e-7■■■■□ 24.2
SUB1P53999 UBC-210ENST00000541645 548 ntTSL 213.69□□□□□ -0.222e-34■■■■□ 24.2
SUB1P53999 UBC-203ENST00000535859 582 ntTSL 210.91□□□□□ -0.662e-34■■■■□ 24.2
SUB1P53999 UBC-202ENST00000535131 563 ntTSL 59.37□□□□□ -0.912e-34■■■■□ 24.2
SUB1P53999 UBC-212ENST00000544481 477 ntTSL 49.16□□□□□ -0.942e-34■■■■□ 24.2
SUB1P53999 UBC-207ENST00000540351 622 ntTSL 1 (best)9□□□□□ -0.972e-34■■■■□ 24.2
SUB1P53999 UBC-214ENST00000546271 559 ntTSL 48.98□□□□□ -0.972e-34■■■■□ 24.2
SUB1P53999 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.993e-7■■■■□ 24.1
SUB1P53999 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.42■□□□□ 0.383e-7■■■■□ 24.1
SUB1P53999 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.993e-7■■■■□ 24.1
SUB1P53999 TPI1-209ENST00000535434 1587 ntTSL 2 BASIC8.18□□□□□ -1.13e-7■■■■□ 24.1
SUB1P53999 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.211e-323■■■■□ 24.1
SUB1P53999 RPS12-202ENST00000484616 639 ntTSL 22.61□□□□□ -1.991e-323■■■■□ 24.1
SUB1P53999 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.441e-10■■■■□ 24.1
SUB1P53999 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.461e-10■■■■□ 24.1
SUB1P53999 KHDRBS1-203ENST00000484270 1989 ntTSL 515.64■□□□□ 0.092e-13■■■■□ 24.1
SUB1P53999 KHDRBS1-201ENST00000307714 2738 ntTSL 1 (best)15.03■□□□□ -02e-13■■■■□ 24.1
SUB1P53999 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.452e-13■■■■□ 24.1
SUB1P53999 DCTN2-215ENST00000550201 1527 ntTSL 510.12□□□□□ -0.795e-8■■■■□ 24.1
SUB1P53999 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC9.7□□□□□ -0.865e-8■■■■□ 24.1
SUB1P53999 DCTN2-209ENST00000548249 2061 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.15e-8■■■■□ 24.1
SUB1P53999 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.633e-7■■■■□ 24.1
SUB1P53999 PSMA5-204ENST00000490870 1667 ntTSL 1 (best)8.11□□□□□ -1.113e-7■■■■□ 24.1
SUB1P53999 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.036e-7■■■■□ 24
SUB1P53999 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.81e-6■■■■□ 24
SUB1P53999 POLR1D-210ENST00000627604 565 ntTSL 416.91■□□□□ 0.31e-6■■■■□ 24
SUB1P53999 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.27■□□□□ 0.041e-6■■■■□ 24
SUB1P53999 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.58□□□□□ -0.081e-6■■■■□ 24
SUB1P53999 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.39□□□□□ -0.111e-6■■■■□ 24
SUB1P53999 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.82□□□□□ -0.361e-6■■■■□ 24
SUB1P53999 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.49□□□□□ -0.411e-6■■■■□ 24
SUB1P53999 POLR1D-204ENST00000465887 2118 ntTSL 212.38□□□□□ -0.431e-6■■■■□ 24
SUB1P53999 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC8.52□□□□□ -1.051e-6■■■■□ 24
SUB1P53999 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.19□□□□□ -1.581e-6■■■■□ 24
SUB1P53999 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.891e-6■■■■□ 24
SUB1P53999 POLR1D-222ENST00000637389 129 ntTSL 50.17□□□□□ -2.381e-6■■■■□ 24
SUB1P53999 MTCH1-205ENST00000471737 629 ntTSL 210.3□□□□□ -0.762e-25■■■■□ 24
SUB1P53999 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.911e-323■■■■□ 24
SUB1P53999 EEF2-207ENST00000600794 352 ntTSL 36.79□□□□□ -1.321e-323■■■■□ 24
SUB1P53999 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.061e-6■■■■□ 24
SUB1P53999 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.23□□□□□ -0.291e-6■■■■□ 23.9
SUB1P53999 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.14□□□□□ -0.631e-6■■■■□ 23.9
SUB1P53999 CARS-212ENST00000526890 5732 ntTSL 210.17□□□□□ -0.781e-6■■■■□ 23.9
SUB1P53999 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.12□□□□□ -0.791e-6■■■■□ 23.9
SUB1P53999 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.831e-6■■■■□ 23.9
SUB1P53999 CARS-215ENST00000531387 2805 ntTSL 28.49□□□□□ -1.051e-6■■■■□ 23.9
SUB1P53999 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.73■□□□□ 0.595e-7■■■■□ 23.9
SUB1P53999 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.73■□□□□ 0.595e-7■■■■□ 23.9
SUB1P53999 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.225e-7■■■■□ 23.9
SUB1P53999 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.085e-7■■■■□ 23.9
SUB1P53999 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.18■□□□□ 0.021e-13■■■■□ 23.9
SUB1P53999 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC10.45□□□□□ -0.741e-13■■■■□ 23.9
SUB1P53999 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.551e-8■■■■□ 23.9
SUB1P53999 MAP2K1-203ENST00000566326 1432 ntTSL 5 BASIC8.14□□□□□ -1.111e-8■■■■□ 23.9
SUB1P53999 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC9.05□□□□□ -0.964e-10■■■■□ 23.8
SUB1P53999 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.064e-10■■■■□ 23.8
SUB1P53999 THYN1-201ENST00000341541 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.074e-10■■■■□ 23.8
SUB1P53999 THYN1-204ENST00000392595 893 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.074e-10■■■■□ 23.8
SUB1P53999 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.253e-8■■■■□ 23.8
SUB1P53999 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.86□□□□□ -0.513e-8■■■■□ 23.8
SUB1P53999 PTGES3-206ENST00000537473 2939 ntTSL 211.07□□□□□ -0.643e-8■■■■□ 23.8
SUB1P53999 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.697e-35■■■■□ 23.8
SUB1P53999 CCNI-208ENST00000515468 636 ntTSL 34.14□□□□□ -1.757e-35■■■■□ 23.8
SUB1P53999 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.27■□□□□ 0.042e-29■■■■□ 23.8
SUB1P53999 SNHG6-205ENST00000521399 302 ntTSL 214.76□□□□□ -0.052e-29■■■■□ 23.8
SUB1P53999 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.73□□□□□ -0.372e-29■■■■□ 23.8
SUB1P53999 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.89□□□□□ -2.112e-29■■■■□ 23.8
SUB1P53999 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.297e-7■■■■□ 23.7
SUB1P53999 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.767e-7■■■■□ 23.7
SUB1P53999 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.263e-9■■■■□ 23.7
SUB1P53999 VAT1-208ENST00000590924 613 ntTSL 313.76□□□□□ -0.213e-9■■■■□ 23.7
SUB1P53999 SGTA-204ENST00000589251 637 ntTSL 39.34□□□□□ -0.913e-9■■■■□ 23.7
SUB1P53999 VAT1-206ENST00000589709 570 ntTSL 49.02□□□□□ -0.973e-9■■■■□ 23.7
Retrieved 100 of 11,644 protein–RNA pairs in 183.6 ms