Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGA2P52926 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGA2P52926 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGA2P52926 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA2P52926 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA2P52926 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGA2P52926 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HMGA2P52926 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGA2P52926 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA2P52926 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGA2P52926 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGA2P52926 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.1■□□□□ 0.65
HMGA2P52926 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.1■□□□□ 0.65
HMGA2P52926 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA2P52926 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA2P52926 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA2P52926 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGA2P52926 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HMGA2P52926 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HMGA2P52926 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HMGA2P52926 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HMGA2P52926 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HMGA2P52926 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HMGA2P52926 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HMGA2P52926 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGA2P52926 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGA2P52926 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGA2P52926 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA2P52926 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HMGA2P52926 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGA2P52926 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGA2P52926 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA2P52926 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA2P52926 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA2P52926 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA2P52926 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HMGA2P52926 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGA2P52926 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.08■□□□□ 0.65
HMGA2P52926 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HMGA2P52926 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HMGA2P52926 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGA2P52926 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGA2P52926 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGA2P52926 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGA2P52926 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA2P52926 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA2P52926 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HMGA2P52926 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGA2P52926 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA2P52926 BX005040.4-201ENST00000637145 1518 ntBASIC19.08■□□□□ 0.64
HMGA2P52926 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGA2P52926 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGA2P52926 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGA2P52926 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGA2P52926 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HMGA2P52926 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HMGA2P52926 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGA2P52926 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGA2P52926 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HMGA2P52926 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGA2P52926 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
HMGA2P52926 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGA2P52926 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGA2P52926 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
HMGA2P52926 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGA2P52926 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGA2P52926 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGA2P52926 AL356441.2-201ENST00000443009 864 ntBASIC19.06■□□□□ 0.64
HMGA2P52926 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGA2P52926 AC233992.3-201ENST00000607491 485 ntBASIC19.06■□□□□ 0.64
HMGA2P52926 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGA2P52926 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.06■□□□□ 0.64
HMGA2P52926 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HMGA2P52926 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGA2P52926 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HMGA2P52926 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGA2P52926 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HMGA2P52926 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMGA2P52926 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms