Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KLHL41O60662 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.65■□□□□ 0.9
KLHL41O60662 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHL41O60662 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KLHL41O60662 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.64■□□□□ 0.9
KLHL41O60662 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KLHL41O60662 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KLHL41O60662 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.64■□□□□ 0.89
KLHL41O60662 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
KLHL41O60662 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.64■□□□□ 0.89
KLHL41O60662 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.64■□□□□ 0.89
KLHL41O60662 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.64■□□□□ 0.89
KLHL41O60662 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.64■□□□□ 0.89
KLHL41O60662 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KLHL41O60662 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KLHL41O60662 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 AL049796.1-201ENST00000565336 1766 ntBASIC20.64■□□□□ 0.89
KLHL41O60662 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHL41O60662 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.64■□□□□ 0.89
KLHL41O60662 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.63■□□□□ 0.89
KLHL41O60662 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KLHL41O60662 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KLHL41O60662 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.63■□□□□ 0.89
KLHL41O60662 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KLHL41O60662 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.63■□□□□ 0.89
KLHL41O60662 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KLHL41O60662 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.63■□□□□ 0.89
KLHL41O60662 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
KLHL41O60662 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 OR2I1P-207ENST00000453522 948 ntBASIC20.63■□□□□ 0.89
KLHL41O60662 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.63■□□□□ 0.89
KLHL41O60662 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.63■□□□□ 0.89
KLHL41O60662 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.63■□□□□ 0.89
KLHL41O60662 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHL41O60662 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KLHL41O60662 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KLHL41O60662 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.62■□□□□ 0.89
KLHL41O60662 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.62■□□□□ 0.89
KLHL41O60662 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.62■□□□□ 0.89
KLHL41O60662 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.62■□□□□ 0.89
KLHL41O60662 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.62■□□□□ 0.89
KLHL41O60662 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.62■□□□□ 0.89
KLHL41O60662 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
KLHL41O60662 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.62■□□□□ 0.89
KLHL41O60662 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
KLHL41O60662 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KLHL41O60662 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KLHL41O60662 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.62■□□□□ 0.89
KLHL41O60662 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL41O60662 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.61■□□□□ 0.89
KLHL41O60662 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL41O60662 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
KLHL41O60662 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL41O60662 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL41O60662 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.61■□□□□ 0.89
KLHL41O60662 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL41O60662 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.61■□□□□ 0.89
KLHL41O60662 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
KLHL41O60662 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.61■□□□□ 0.89
KLHL41O60662 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHL41O60662 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHL41O60662 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.6■□□□□ 0.89
KLHL41O60662 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
KLHL41O60662 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHL41O60662 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHL41O60662 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms