Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.26■□□□□ 0.83
PEX1O43933 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.26■□□□□ 0.83
PEX1O43933 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.26■□□□□ 0.83
PEX1O43933 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.26■□□□□ 0.83
PEX1O43933 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PEX1O43933 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.26■□□□□ 0.83
PEX1O43933 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PEX1O43933 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.25■□□□□ 0.83
PEX1O43933 OR2I1P-207ENST00000453522 948 ntBASIC20.25■□□□□ 0.83
PEX1O43933 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.25■□□□□ 0.83
PEX1O43933 AC010525.1-201ENST00000585559 441 ntBASIC20.25■□□□□ 0.83
PEX1O43933 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.25■□□□□ 0.83
PEX1O43933 MIR6821-201ENST00000617625 74 ntBASIC20.25■□□□□ 0.83
PEX1O43933 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
PEX1O43933 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.25■□□□□ 0.83
PEX1O43933 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PEX1O43933 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.24■□□□□ 0.83
PEX1O43933 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEX1O43933 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEX1O43933 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEX1O43933 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEX1O43933 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.24■□□□□ 0.83
PEX1O43933 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.24■□□□□ 0.83
PEX1O43933 AC097381.1-201ENST00000429019 1296 ntBASIC20.24■□□□□ 0.83
PEX1O43933 IGHV3-19-201ENST00000521488 291 ntBASIC20.24■□□□□ 0.83
PEX1O43933 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.24■□□□□ 0.83
PEX1O43933 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEX1O43933 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PEX1O43933 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PEX1O43933 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PEX1O43933 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PEX1O43933 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.23■□□□□ 0.83
PEX1O43933 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PEX1O43933 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
PEX1O43933 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.23■□□□□ 0.83
PEX1O43933 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.23■□□□□ 0.83
PEX1O43933 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.23■□□□□ 0.83
PEX1O43933 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.23■□□□□ 0.83
PEX1O43933 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
PEX1O43933 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PEX1O43933 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PEX1O43933 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 GABARAPL3-202ENST00000624044 1851 ntBASIC20.22■□□□□ 0.83
PEX1O43933 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.22■□□□□ 0.83
PEX1O43933 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
PEX1O43933 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PEX1O43933 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PEX1O43933 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PEX1O43933 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.22■□□□□ 0.83
PEX1O43933 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PEX1O43933 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PEX1O43933 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.22■□□□□ 0.83
PEX1O43933 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.22■□□□□ 0.83
PEX1O43933 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.22■□□□□ 0.83
PEX1O43933 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PEX1O43933 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.22■□□□□ 0.83
PEX1O43933 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PEX1O43933 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
PEX1O43933 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEX1O43933 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.21■□□□□ 0.83
PEX1O43933 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms