Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV12-3A0A0B4J271 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 MIR939-201ENST00000401314 82 ntBASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-3A0A0B4J271 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 AL049796.1-201ENST00000565336 1766 ntBASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 AC091305.1-201ENST00000479476 895 ntBASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-3A0A0B4J271 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 BX005040.4-201ENST00000637145 1518 ntBASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 MIR572-201ENST00000384983 95 ntBASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
TRAV12-3A0A0B4J271 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 AC005224.4-201ENST00000583262 1652 ntBASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms