Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RGP1Q92546 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RGP1Q92546 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.3■□□□□ 0.52
RGP1Q92546 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RGP1Q92546 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
RGP1Q92546 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
RGP1Q92546 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.29■□□□□ 0.52
RGP1Q92546 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RGP1Q92546 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RGP1Q92546 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.29■□□□□ 0.52
RGP1Q92546 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGP1Q92546 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.29■□□□□ 0.52
RGP1Q92546 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.29■□□□□ 0.52
RGP1Q92546 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RGP1Q92546 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.29■□□□□ 0.52
RGP1Q92546 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
RGP1Q92546 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RGP1Q92546 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.28■□□□□ 0.52
RGP1Q92546 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.28■□□□□ 0.52
RGP1Q92546 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RGP1Q92546 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.28■□□□□ 0.52
RGP1Q92546 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGP1Q92546 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RGP1Q92546 AC121338.2-201ENST00000622535 1744 ntBASIC18.27■□□□□ 0.52
RGP1Q92546 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RGP1Q92546 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.27■□□□□ 0.52
RGP1Q92546 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RGP1Q92546 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.27■□□□□ 0.52
RGP1Q92546 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.27■□□□□ 0.52
RGP1Q92546 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.27■□□□□ 0.52
RGP1Q92546 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RGP1Q92546 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.51
RGP1Q92546 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RGP1Q92546 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.27■□□□□ 0.51
RGP1Q92546 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.27■□□□□ 0.51
RGP1Q92546 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.27■□□□□ 0.51
RGP1Q92546 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RGP1Q92546 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RGP1Q92546 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RGP1Q92546 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RGP1Q92546 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RGP1Q92546 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RGP1Q92546 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RGP1Q92546 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RGP1Q92546 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RGP1Q92546 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.26■□□□□ 0.51
RGP1Q92546 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RGP1Q92546 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.26■□□□□ 0.51
RGP1Q92546 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.26■□□□□ 0.51
RGP1Q92546 DUX4L19-201ENST00000557448 1267 ntBASIC18.26■□□□□ 0.51
RGP1Q92546 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.26■□□□□ 0.51
RGP1Q92546 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.26■□□□□ 0.51
RGP1Q92546 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RGP1Q92546 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RGP1Q92546 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RGP1Q92546 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RGP1Q92546 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
RGP1Q92546 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.25■□□□□ 0.51
RGP1Q92546 PCDHAC2-203ENST00000615316 3011 ntBASIC18.25■□□□□ 0.51
RGP1Q92546 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RGP1Q92546 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RGP1Q92546 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.25■□□□□ 0.51
RGP1Q92546 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
RGP1Q92546 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RGP1Q92546 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RGP1Q92546 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RGP1Q92546 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RGP1Q92546 RNF165-205ENST00000588679 2904 ntBASIC18.25■□□□□ 0.51
RGP1Q92546 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RGP1Q92546 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RGP1Q92546 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RGP1Q92546 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.25■□□□□ 0.51
RGP1Q92546 AC133561.4-201ENST00000566112 224 ntBASIC18.25■□□□□ 0.51
RGP1Q92546 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.25■□□□□ 0.51
RGP1Q92546 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.25■□□□□ 0.51
RGP1Q92546 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms