Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.09■■□□□ 1.138e-7■■■■■ 26.9
RPS3P23396 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.11■□□□□ 0.818e-7■■■■■ 26.9
RPS3P23396 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.98■□□□□ 0.798e-7■■■■■ 26.9
RPS3P23396 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.698e-7■■■■■ 26.9
RPS3P23396 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.25■□□□□ 0.518e-7■■■■■ 26.9
RPS3P23396 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.37■□□□□ 0.378e-7■■■■■ 26.9
RPS3P23396 PSMA1-204ENST00000526443 569 ntTSL 26.2□□□□□ -1.424e-8■■■■■ 26.9
RPS3P23396 PGD-203ENST00000465632 642 ntTSL 212.62□□□□□ -0.393e-7■■■■■ 26.9
RPS3P23396 GANAB-214ENST00000534613 737 ntTSL 514.67□□□□□ -0.064e-9■■■■■ 26.9
RPS3P23396 PFAS-207ENST00000581288 527 ntTSL 411.86□□□□□ -0.512e-6■■■■■ 26.9
RPS3P23396 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.065e-7■■■■■ 26.9
RPS3P23396 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.47□□□□□ -0.095e-7■■■■■ 26.9
RPS3P23396 HYAL1-205ENST00000418723 567 ntTSL 411.86□□□□□ -0.512e-6■■■■■ 26.8
RPS3P23396 HYAL1-207ENST00000452672 561 ntTSL 411.18□□□□□ -0.622e-6■■■■■ 26.8
RPS3P23396 HLA-H-201ENST00000383620 1096 ntBASIC16.03■□□□□ 0.162e-6■■■■■ 26.8
RPS3P23396 CCNY-209ENST00000493157 816 ntTSL 516.5■□□□□ 0.234e-8■■■■■ 26.8
RPS3P23396 CCNY-207ENST00000490012 793 ntTSL 314.45□□□□□ -0.14e-8■■■■■ 26.8
RPS3P23396 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.854e-8■■■■■ 26.8
RPS3P23396 SEC61G-205ENST00000460484 1227 ntTSL 1 (best)8.84□□□□□ -0.992e-9■■■■■ 26.8
RPS3P23396 HSPA8-217ENST00000532182 674 ntTSL 410.98□□□□□ -0.652e-10■■■■■ 26.8
RPS3P23396 TCAF1-207ENST00000491908 634 ntTSL 29.76□□□□□ -0.857e-16■■■■■ 26.8
RPS3P23396 TCAF1-206ENST00000485416 577 ntTSL 49.68□□□□□ -0.867e-16■■■■■ 26.8
RPS3P23396 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.78□□□□□ -1.641e-13■■■■■ 26.8
RPS3P23396 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.437e-9■■■■□ 26.7
RPS3P23396 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.279e-8■■■■□ 26.7
RPS3P23396 SDF4-205ENST00000465727 2095 ntTSL 219.12■□□□□ 0.659e-8■■■■□ 26.7
RPS3P23396 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.479e-8■■■■□ 26.7
RPS3P23396 P4HA2-215ENST00000453286 819 ntTSL 515.73■□□□□ 0.111e-6■■■■□ 26.7
RPS3P23396 P4HA2-211ENST00000428369 751 ntTSL 29.27□□□□□ -0.931e-6■■■■□ 26.7
RPS3P23396 P4HA2-210ENST00000418055 568 ntTSL 58.05□□□□□ -1.121e-6■■■■□ 26.7
RPS3P23396 YWHAE-213ENST00000576854 1374 nt22■■□□□ 1.112e-40■■■■□ 26.7
RPS3P23396 YWHAE-204ENST00000486241 691 ntTSL 214.66□□□□□ -0.062e-40■■■■□ 26.7
RPS3P23396 YWHAE-205ENST00000489287 465 ntTSL 211.17□□□□□ -0.622e-40■■■■□ 26.7
RPS3P23396 YWHAE-207ENST00000498643 312 ntTSL 39.96□□□□□ -0.822e-40■■■■□ 26.7
RPS3P23396 YWHAE-203ENST00000469398 676 ntTSL 28.64□□□□□ -1.032e-40■■■■□ 26.7
RPS3P23396 APEX1-208ENST00000554813 654 ntTSL 312.89□□□□□ -0.359e-7■■■■□ 26.7
RPS3P23396 APEX1-215ENST00000557150 740 ntTSL 312.15□□□□□ -0.461e-6■■■■□ 26.7
RPS3P23396 APEX1-212ENST00000556054 773 ntTSL 311.91□□□□□ -0.51e-6■■■■□ 26.7
RPS3P23396 APEX1-220ENST00000557592 640 ntTSL 511.15□□□□□ -0.621e-6■■■■□ 26.7
RPS3P23396 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.11e-6■■■■□ 26.7
RPS3P23396 DNASE2-204ENST00000592506 745 ntTSL 215.03■□□□□ -01e-6■■■■□ 26.7
RPS3P23396 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.844e-7■■■■□ 26.7
RPS3P23396 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.934e-7■■■■□ 26.7
RPS3P23396 GALK1-208ENST00000592494 1121 ntTSL 519.07■□□□□ 0.644e-7■■■■□ 26.7
RPS3P23396 GALK1-204ENST00000587707 667 ntTSL 516.42■□□□□ 0.224e-7■■■■□ 26.7
RPS3P23396 PSMA3-203ENST00000553665 925 ntTSL 26.45□□□□□ -1.381e-8■■■■□ 26.7
RPS3P23396 UROD-207ENST00000462688 901 ntTSL 512□□□□□ -0.496e-10■■■■□ 26.7
RPS3P23396 UROD-217ENST00000491300 884 ntTSL 510.79□□□□□ -0.686e-10■■■■□ 26.7
RPS3P23396 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.3■□□□□ 0.521e-6■■■■□ 26.7
RPS3P23396 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.92■□□□□ 0.141e-6■■■■□ 26.7
RPS3P23396 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.061e-6■■■■□ 26.7
RPS3P23396 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.063e-7■■■■□ 26.7
RPS3P23396 PELP1-214ENST00000575329 3280 ntTSL 214.84□□□□□ -0.033e-7■■■■□ 26.7
RPS3P23396 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.23e-7■■■■□ 26.7
RPS3P23396 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.51□□□□□ -0.253e-7■■■■□ 26.7
RPS3P23396 PELP1-211ENST00000573523 3878 ntTSL 213.3□□□□□ -0.283e-7■■■■□ 26.7
RPS3P23396 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.313e-7■■■■□ 26.7
RPS3P23396 MYL12A-208ENST00000580353 565 ntTSL 215.61■□□□□ 0.092e-10■■■■□ 26.7
RPS3P23396 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.383e-7■■■■□ 26.6
RPS3P23396 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.323e-7■■■■□ 26.6
RPS3P23396 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.33e-7■■■■□ 26.6
RPS3P23396 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.223e-7■■■■□ 26.6
RPS3P23396 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.163e-7■■■■□ 26.6
RPS3P23396 TEX264-213ENST00000489026 800 ntTSL 215.03■□□□□ -03e-7■■■■□ 26.6
RPS3P23396 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.13e-7■■■■□ 26.6
RPS3P23396 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.183e-7■■■■□ 26.6
RPS3P23396 TEX264-211ENST00000463857 3937 ntTSL 1 (best)12.79□□□□□ -0.363e-7■■■■□ 26.6
RPS3P23396 LGALS3BP-207ENST00000587311 1905 ntTSL 216.82■□□□□ 0.287e-21■■■■□ 26.6
RPS3P23396 LGALS3BP-204ENST00000586720 1736 ntTSL 516.75■□□□□ 0.277e-21■■■■□ 26.6
RPS3P23396 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.48■□□□□ 0.237e-21■■■■□ 26.6
RPS3P23396 LGALS3BP-205ENST00000587251 2091 ntTSL 516.35■□□□□ 0.217e-21■■■■□ 26.6
RPS3P23396 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.417e-21■■■■□ 26.6
RPS3P23396 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.615e-7■■■■□ 26.6
RPS3P23396 PHGDH-218ENST00000641491 986 nt12.79□□□□□ -0.366e-8■■■■□ 26.6
RPS3P23396 PHGDH-220ENST00000641570 1036 nt12.79□□□□□ -0.366e-8■■■■□ 26.6
RPS3P23396 LMNA-217ENST00000498722 1348 ntTSL 215.71■□□□□ 0.118e-10■■■■□ 26.6
RPS3P23396 LAP3-205ENST00000508014 494 ntTSL 413.82□□□□□ -0.25e-9■■■■□ 26.6
RPS3P23396 LAP3-207ENST00000509583 887 ntTSL 1 (best)11.11□□□□□ -0.635e-9■■■■□ 26.6
RPS3P23396 LAP3-204ENST00000507960 435 ntTSL 58.38□□□□□ -1.075e-9■■■■□ 26.6
RPS3P23396 PSMA3-210ENST00000556321 500 ntTSL 23.23□□□□□ -1.891e-8■■■■□ 26.6
RPS3P23396 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.94■□□□□ 0.787e-9■■■■□ 26.6
RPS3P23396 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.657e-9■■■■□ 26.6
RPS3P23396 ARF3-204ENST00000485410 563 ntTSL 318.69■□□□□ 0.587e-9■■■■□ 26.6
RPS3P23396 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.467e-9■■■■□ 26.6
RPS3P23396 ARF3-207ENST00000541236 485 ntTSL 211.73□□□□□ -0.534e-9■■■■□ 26.6
RPS3P23396 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.937e-9■■■■□ 26.6
RPS3P23396 PSMF1-204ENST00000381898 642 ntTSL 314.26□□□□□ -0.132e-8■■■■□ 26.6
RPS3P23396 PSMF1-207ENST00000435720 319 ntTSL 58.06□□□□□ -1.122e-8■■■■□ 26.6
RPS3P23396 PSMF1-210ENST00000484891 4030 ntTSL 27.39□□□□□ -1.232e-8■■■■□ 26.6
RPS3P23396 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.52■□□□□ 0.563e-12■■■■□ 26.6
RPS3P23396 HSPA8-208ENST00000526686 740 ntTSL 1 (best)1.87□□□□□ -2.113e-13■■■■□ 26.6
RPS3P23396 BCAM-210ENST00000591520 878 ntTSL 319.4■□□□□ 0.74e-14■■■■□ 26.5
RPS3P23396 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.072e-7■■■■□ 26.5
RPS3P23396 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.092e-7■■■■□ 26.5
RPS3P23396 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.372e-7■■■■□ 26.5
RPS3P23396 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.077e-7■■■■□ 26.5
RPS3P23396 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.567e-7■■■■□ 26.5
RPS3P23396 AP3M1-203ENST00000480373 462 ntTSL 32.61□□□□□ -1.997e-8■■■■□ 26.5
RPS3P23396 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.163e-6■■■■□ 26.5
RPS3P23396 SEC13-217ENST00000482647 782 ntTSL 220.46■□□□□ 0.876e-14■■■■□ 26.5
Retrieved 100 of 24,271 protein–RNA pairs in 150.3 ms