Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV3-43A0A0B4J1X8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AC105265.2-201ENST00000467189 838 ntBASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV3-43A0A0B4J1X8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.37■□□□□ 0.37
IGHV3-43A0A0B4J1X8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.36■□□□□ 0.37
IGHV3-43A0A0B4J1X8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MIR638-201ENST00000385237 100 ntBASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AL354811.1-201ENST00000610286 706 ntBASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV3-43A0A0B4J1X8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 AL049796.1-201ENST00000565336 1766 ntBASIC17.34■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
IGHV3-43A0A0B4J1X8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms