Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.42■■■□□ 2.3
PCDHGC5Q9Y5F6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.42■■■□□ 2.3
PCDHGC5Q9Y5F6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHGC5Q9Y5F6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.42■■■□□ 2.3
PCDHGC5Q9Y5F6 HLA-V-202ENST00000446817 847 ntBASIC29.41■■■□□ 2.3
PCDHGC5Q9Y5F6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHGC5Q9Y5F6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
PCDHGC5Q9Y5F6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHGC5Q9Y5F6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
PCDHGC5Q9Y5F6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.35■■■□□ 2.29
PCDHGC5Q9Y5F6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.35■■■□□ 2.29
PCDHGC5Q9Y5F6 AC120057.4-201ENST00000624722 1615 ntBASIC29.34■■■□□ 2.29
PCDHGC5Q9Y5F6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHGC5Q9Y5F6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHGC5Q9Y5F6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHGC5Q9Y5F6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.31■■■□□ 2.28
PCDHGC5Q9Y5F6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.31■■■□□ 2.28
PCDHGC5Q9Y5F6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.31■■■□□ 2.28
PCDHGC5Q9Y5F6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.31■■■□□ 2.28
PCDHGC5Q9Y5F6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.3■■■□□ 2.28
PCDHGC5Q9Y5F6 ZNRF2P2-203ENST00000454624 420 ntBASIC29.3■■■□□ 2.28
PCDHGC5Q9Y5F6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHGC5Q9Y5F6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHGC5Q9Y5F6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHGC5Q9Y5F6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHGC5Q9Y5F6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHGC5Q9Y5F6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGC5Q9Y5F6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGC5Q9Y5F6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.27■■■□□ 2.28
PCDHGC5Q9Y5F6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGC5Q9Y5F6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGC5Q9Y5F6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGC5Q9Y5F6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHGC5Q9Y5F6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHGC5Q9Y5F6 WASH5P-204ENST00000632292 975 ntBASIC29.24■■■□□ 2.27
PCDHGC5Q9Y5F6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHGC5Q9Y5F6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHGC5Q9Y5F6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.23■■■□□ 2.27
PCDHGC5Q9Y5F6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.23■■■□□ 2.27
PCDHGC5Q9Y5F6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHGC5Q9Y5F6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHGC5Q9Y5F6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.22■■■□□ 2.27
PCDHGC5Q9Y5F6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
PCDHGC5Q9Y5F6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCDHGC5Q9Y5F6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.2■■■□□ 2.26
PCDHGC5Q9Y5F6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PCDHGC5Q9Y5F6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.19■■■□□ 2.26
PCDHGC5Q9Y5F6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHGC5Q9Y5F6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHGC5Q9Y5F6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.18■■■□□ 2.26
PCDHGC5Q9Y5F6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHGC5Q9Y5F6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGC5Q9Y5F6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGC5Q9Y5F6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.17■■■□□ 2.26
PCDHGC5Q9Y5F6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.16■■■□□ 2.26
PCDHGC5Q9Y5F6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHGC5Q9Y5F6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHGC5Q9Y5F6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHGC5Q9Y5F6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHGC5Q9Y5F6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHGC5Q9Y5F6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHGC5Q9Y5F6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHGC5Q9Y5F6 ABCB10P1-201ENST00000614297 2181 ntBASIC29.12■■■□□ 2.25
PCDHGC5Q9Y5F6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHGC5Q9Y5F6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
PCDHGC5Q9Y5F6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.11■■■□□ 2.25
PCDHGC5Q9Y5F6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.11■■■□□ 2.25
PCDHGC5Q9Y5F6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
PCDHGC5Q9Y5F6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.11■■■□□ 2.25
PCDHGC5Q9Y5F6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHGC5Q9Y5F6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.09■■■□□ 2.25
PCDHGC5Q9Y5F6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.08■■■□□ 2.25
PCDHGC5Q9Y5F6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHGC5Q9Y5F6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
PCDHGC5Q9Y5F6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.08■■■□□ 2.25
PCDHGC5Q9Y5F6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHGC5Q9Y5F6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHGC5Q9Y5F6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHGC5Q9Y5F6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.06■■■□□ 2.24
PCDHGC5Q9Y5F6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PCDHGC5Q9Y5F6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.05■■■□□ 2.24
PCDHGC5Q9Y5F6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHGC5Q9Y5F6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHGC5Q9Y5F6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHGC5Q9Y5F6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHGC5Q9Y5F6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.04■■■□□ 2.24
PCDHGC5Q9Y5F6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHGC5Q9Y5F6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCDHGC5Q9Y5F6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCDHGC5Q9Y5F6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.02■■■□□ 2.24
PCDHGC5Q9Y5F6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.01■■■□□ 2.23
PCDHGC5Q9Y5F6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHGC5Q9Y5F6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
PCDHGC5Q9Y5F6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.01■■■□□ 2.23
PCDHGC5Q9Y5F6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHGC5Q9Y5F6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHGC5Q9Y5F6 DUX4L29-201ENST00000425409 679 ntBASIC29■■■□□ 2.23
PCDHGC5Q9Y5F6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
PCDHGC5Q9Y5F6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHGC5Q9Y5F6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.99■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms