Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.74■■■□□ 2.51
PCDHA6Q9UN73 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHA6Q9UN73 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.72■■■□□ 2.51
PCDHA6Q9UN73 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
PCDHA6Q9UN73 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHA6Q9UN73 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHA6Q9UN73 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHA6Q9UN73 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHA6Q9UN73 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHA6Q9UN73 MIR3665-201ENST00000578708 105 ntBASIC30.7■■■□□ 2.51
PCDHA6Q9UN73 AC005559.1-201ENST00000589661 871 ntBASIC30.7■■■□□ 2.51
PCDHA6Q9UN73 DUX4L28-201ENST00000623687 678 ntBASIC30.7■■■□□ 2.51
PCDHA6Q9UN73 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.7■■■□□ 2.5
PCDHA6Q9UN73 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA6Q9UN73 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA6Q9UN73 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.69■■■□□ 2.5
PCDHA6Q9UN73 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA6Q9UN73 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA6Q9UN73 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA6Q9UN73 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
PCDHA6Q9UN73 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA6Q9UN73 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA6Q9UN73 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA6Q9UN73 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA6Q9UN73 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.66■■■□□ 2.5
PCDHA6Q9UN73 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA6Q9UN73 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA6Q9UN73 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA6Q9UN73 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.64■■■□□ 2.5
PCDHA6Q9UN73 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCDHA6Q9UN73 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.64■■■□□ 2.5
PCDHA6Q9UN73 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHA6Q9UN73 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHA6Q9UN73 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHA6Q9UN73 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA6Q9UN73 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA6Q9UN73 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA6Q9UN73 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PCDHA6Q9UN73 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHA6Q9UN73 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
PCDHA6Q9UN73 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHA6Q9UN73 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHA6Q9UN73 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
PCDHA6Q9UN73 AC087741.3-201ENST00000624270 1347 ntBASIC30.57■■■□□ 2.48
PCDHA6Q9UN73 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PCDHA6Q9UN73 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.57■■■□□ 2.48
PCDHA6Q9UN73 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.55■■■□□ 2.48
PCDHA6Q9UN73 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHA6Q9UN73 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.54■■■□□ 2.48
PCDHA6Q9UN73 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCDHA6Q9UN73 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA6Q9UN73 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA6Q9UN73 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
PCDHA6Q9UN73 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA6Q9UN73 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA6Q9UN73 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA6Q9UN73 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.49■■■□□ 2.47
PCDHA6Q9UN73 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.48■■■□□ 2.47
PCDHA6Q9UN73 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHA6Q9UN73 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHA6Q9UN73 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.48■■■□□ 2.47
PCDHA6Q9UN73 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHA6Q9UN73 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.46■■■□□ 2.47
PCDHA6Q9UN73 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.45■■■□□ 2.47
PCDHA6Q9UN73 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
PCDHA6Q9UN73 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDHA6Q9UN73 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCDHA6Q9UN73 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCDHA6Q9UN73 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.43■■■□□ 2.46
PCDHA6Q9UN73 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
PCDHA6Q9UN73 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
PCDHA6Q9UN73 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.43■■■□□ 2.46
PCDHA6Q9UN73 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCDHA6Q9UN73 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.42■■■□□ 2.46
PCDHA6Q9UN73 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCDHA6Q9UN73 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.41■■■□□ 2.46
PCDHA6Q9UN73 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHA6Q9UN73 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHA6Q9UN73 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
PCDHA6Q9UN73 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCDHA6Q9UN73 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PCDHA6Q9UN73 AC044849.2-201ENST00000606596 710 ntBASIC30.4■■■□□ 2.46
PCDHA6Q9UN73 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PCDHA6Q9UN73 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHA6Q9UN73 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
PCDHA6Q9UN73 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
PCDHA6Q9UN73 AL135925.1-201ENST00000605920 1701 ntBASIC30.37■■■□□ 2.45
PCDHA6Q9UN73 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
PCDHA6Q9UN73 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.36■■■□□ 2.45
PCDHA6Q9UN73 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.36■■■□□ 2.45
PCDHA6Q9UN73 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PCDHA6Q9UN73 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PCDHA6Q9UN73 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.33■■■□□ 2.45
PCDHA6Q9UN73 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.33■■■□□ 2.45
PCDHA6Q9UN73 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PCDHA6Q9UN73 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
PCDHA6Q9UN73 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHA6Q9UN73 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHA6Q9UN73 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
PCDHA6Q9UN73 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms