Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PDLIM7Q9NR12 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.32■■■□□ 2.44
PDLIM7Q9NR12 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PDLIM7Q9NR12 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDLIM7Q9NR12 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PDLIM7Q9NR12 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDLIM7Q9NR12 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.29■■■□□ 2.44
PDLIM7Q9NR12 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.29■■■□□ 2.44
PDLIM7Q9NR12 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.28■■■□□ 2.44
PDLIM7Q9NR12 AC021231.2-201ENST00000594613 730 ntBASIC30.28■■■□□ 2.44
PDLIM7Q9NR12 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PDLIM7Q9NR12 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
PDLIM7Q9NR12 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PDLIM7Q9NR12 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDLIM7Q9NR12 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDLIM7Q9NR12 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
PDLIM7Q9NR12 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PDLIM7Q9NR12 AC120057.4-201ENST00000624722 1615 ntBASIC30.22■■■□□ 2.43
PDLIM7Q9NR12 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.22■■■□□ 2.43
PDLIM7Q9NR12 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDLIM7Q9NR12 HSD17B1P1-201ENST00000590052 955 ntBASIC30.21■■■□□ 2.43
PDLIM7Q9NR12 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDLIM7Q9NR12 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.21■■■□□ 2.43
PDLIM7Q9NR12 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PDLIM7Q9NR12 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.2■■■□□ 2.43
PDLIM7Q9NR12 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.2■■■□□ 2.43
PDLIM7Q9NR12 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.19■■■□□ 2.42
PDLIM7Q9NR12 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.18■■■□□ 2.42
PDLIM7Q9NR12 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.18■■■□□ 2.42
PDLIM7Q9NR12 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDLIM7Q9NR12 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PDLIM7Q9NR12 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PDLIM7Q9NR12 AC016575.1-201ENST00000607026 382 ntBASIC30.17■■■□□ 2.42
PDLIM7Q9NR12 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.16■■■□□ 2.42
PDLIM7Q9NR12 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PDLIM7Q9NR12 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PDLIM7Q9NR12 MIR3648-2-201ENST00000581792 180 ntBASIC30.16■■■□□ 2.42
PDLIM7Q9NR12 MIR3648-1-201ENST00000615959 180 ntBASIC30.16■■■□□ 2.42
PDLIM7Q9NR12 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PDLIM7Q9NR12 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDLIM7Q9NR12 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDLIM7Q9NR12 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDLIM7Q9NR12 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.14■■■□□ 2.42
PDLIM7Q9NR12 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
PDLIM7Q9NR12 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDLIM7Q9NR12 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.13■■■□□ 2.41
PDLIM7Q9NR12 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
PDLIM7Q9NR12 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
PDLIM7Q9NR12 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PDLIM7Q9NR12 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PDLIM7Q9NR12 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.09■■■□□ 2.41
PDLIM7Q9NR12 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.09■■■□□ 2.41
PDLIM7Q9NR12 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.09■■■□□ 2.41
PDLIM7Q9NR12 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PDLIM7Q9NR12 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDLIM7Q9NR12 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.06■■■□□ 2.4
PDLIM7Q9NR12 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.06■■■□□ 2.4
PDLIM7Q9NR12 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PDLIM7Q9NR12 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PDLIM7Q9NR12 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
PDLIM7Q9NR12 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
PDLIM7Q9NR12 CR559946.2-201ENST00000623684 991 ntBASIC30.02■■■□□ 2.4
PDLIM7Q9NR12 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.01■■■□□ 2.4
PDLIM7Q9NR12 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
PDLIM7Q9NR12 MIR6090-201ENST00000622481 60 ntBASIC30.01■■■□□ 2.39
PDLIM7Q9NR12 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
PDLIM7Q9NR12 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
PDLIM7Q9NR12 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.99■■■□□ 2.39
PDLIM7Q9NR12 DUX4L11-201ENST00000611504 1267 ntBASIC29.99■■■□□ 2.39
PDLIM7Q9NR12 DUX4L12-201ENST00000614593 1267 ntBASIC29.99■■■□□ 2.39
PDLIM7Q9NR12 DUX4L14-201ENST00000621227 1267 ntBASIC29.99■■■□□ 2.39
PDLIM7Q9NR12 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.99■■■□□ 2.39
PDLIM7Q9NR12 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
PDLIM7Q9NR12 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
PDLIM7Q9NR12 AC108673.1-201ENST00000510422 1159 ntBASIC29.98■■■□□ 2.39
PDLIM7Q9NR12 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.98■■■□□ 2.39
PDLIM7Q9NR12 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.97■■■□□ 2.39
PDLIM7Q9NR12 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PDLIM7Q9NR12 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDLIM7Q9NR12 LINC01971-201ENST00000617888 1048 ntBASIC29.96■■■□□ 2.39
PDLIM7Q9NR12 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PDLIM7Q9NR12 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
PDLIM7Q9NR12 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.93■■■□□ 2.38
PDLIM7Q9NR12 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PDLIM7Q9NR12 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.92■■■□□ 2.38
PDLIM7Q9NR12 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PDLIM7Q9NR12 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
PDLIM7Q9NR12 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PDLIM7Q9NR12 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
PDLIM7Q9NR12 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
PDLIM7Q9NR12 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.89■■■□□ 2.38
PDLIM7Q9NR12 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
PDLIM7Q9NR12 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
PDLIM7Q9NR12 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PDLIM7Q9NR12 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PDLIM7Q9NR12 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.87■■■□□ 2.37
PDLIM7Q9NR12 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PDLIM7Q9NR12 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PDLIM7Q9NR12 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PDLIM7Q9NR12 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.86■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms