Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.02■■■□□ 2.4
ZSWIM4Q9H7M6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
ZSWIM4Q9H7M6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
ZSWIM4Q9H7M6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
ZSWIM4Q9H7M6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30■■■□□ 2.39
ZSWIM4Q9H7M6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30■■■□□ 2.39
ZSWIM4Q9H7M6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
ZSWIM4Q9H7M6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ZSWIM4Q9H7M6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZSWIM4Q9H7M6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.99■■■□□ 2.39
ZSWIM4Q9H7M6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.99■■■□□ 2.39
ZSWIM4Q9H7M6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.99■■■□□ 2.39
ZSWIM4Q9H7M6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZSWIM4Q9H7M6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZSWIM4Q9H7M6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZSWIM4Q9H7M6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.98■■■□□ 2.39
ZSWIM4Q9H7M6 AC005559.1-201ENST00000589661 871 ntBASIC29.98■■■□□ 2.39
ZSWIM4Q9H7M6 AL162393.1-201ENST00000437852 946 ntBASIC29.97■■■□□ 2.39
ZSWIM4Q9H7M6 MIR3665-201ENST00000578708 105 ntBASIC29.97■■■□□ 2.39
ZSWIM4Q9H7M6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZSWIM4Q9H7M6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ZSWIM4Q9H7M6 AL161658.1-201ENST00000623641 1967 ntBASIC29.95■■■□□ 2.39
ZSWIM4Q9H7M6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.95■■■□□ 2.39
ZSWIM4Q9H7M6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.94■■■□□ 2.38
ZSWIM4Q9H7M6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.93■■■□□ 2.38
ZSWIM4Q9H7M6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ZSWIM4Q9H7M6 DUX4L28-201ENST00000623687 678 ntBASIC29.93■■■□□ 2.38
ZSWIM4Q9H7M6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZSWIM4Q9H7M6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ZSWIM4Q9H7M6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZSWIM4Q9H7M6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZSWIM4Q9H7M6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ZSWIM4Q9H7M6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
ZSWIM4Q9H7M6 RPS2P35-201ENST00000443417 897 ntBASIC29.9■■■□□ 2.38
ZSWIM4Q9H7M6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZSWIM4Q9H7M6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
ZSWIM4Q9H7M6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ZSWIM4Q9H7M6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.88■■■□□ 2.37
ZSWIM4Q9H7M6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
ZSWIM4Q9H7M6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZSWIM4Q9H7M6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZSWIM4Q9H7M6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZSWIM4Q9H7M6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZSWIM4Q9H7M6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ZSWIM4Q9H7M6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ZSWIM4Q9H7M6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZSWIM4Q9H7M6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ZSWIM4Q9H7M6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.85■■■□□ 2.37
ZSWIM4Q9H7M6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ZSWIM4Q9H7M6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ZSWIM4Q9H7M6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZSWIM4Q9H7M6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZSWIM4Q9H7M6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZSWIM4Q9H7M6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZSWIM4Q9H7M6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.84■■■□□ 2.37
ZSWIM4Q9H7M6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ZSWIM4Q9H7M6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ZSWIM4Q9H7M6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ZSWIM4Q9H7M6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZSWIM4Q9H7M6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.81■■■□□ 2.36
ZSWIM4Q9H7M6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.81■■■□□ 2.36
ZSWIM4Q9H7M6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
ZSWIM4Q9H7M6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
ZSWIM4Q9H7M6 AC087741.3-201ENST00000624270 1347 ntBASIC29.8■■■□□ 2.36
ZSWIM4Q9H7M6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.8■■■□□ 2.36
ZSWIM4Q9H7M6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.8■■■□□ 2.36
ZSWIM4Q9H7M6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZSWIM4Q9H7M6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZSWIM4Q9H7M6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ZSWIM4Q9H7M6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ZSWIM4Q9H7M6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.77■■■□□ 2.36
ZSWIM4Q9H7M6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
ZSWIM4Q9H7M6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
ZSWIM4Q9H7M6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
ZSWIM4Q9H7M6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZSWIM4Q9H7M6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZSWIM4Q9H7M6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ZSWIM4Q9H7M6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZSWIM4Q9H7M6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
ZSWIM4Q9H7M6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.73■■■□□ 2.35
ZSWIM4Q9H7M6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.72■■■□□ 2.35
ZSWIM4Q9H7M6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.71■■■□□ 2.35
ZSWIM4Q9H7M6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ZSWIM4Q9H7M6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ZSWIM4Q9H7M6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
ZSWIM4Q9H7M6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.69■■■□□ 2.34
ZSWIM4Q9H7M6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.69■■■□□ 2.34
ZSWIM4Q9H7M6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ZSWIM4Q9H7M6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.68■■■□□ 2.34
ZSWIM4Q9H7M6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ZSWIM4Q9H7M6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ZSWIM4Q9H7M6 AC044849.2-201ENST00000606596 710 ntBASIC29.67■■■□□ 2.34
ZSWIM4Q9H7M6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
ZSWIM4Q9H7M6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.66■■■□□ 2.34
ZSWIM4Q9H7M6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.65■■■□□ 2.34
ZSWIM4Q9H7M6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ZSWIM4Q9H7M6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.65■■■□□ 2.34
ZSWIM4Q9H7M6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ZSWIM4Q9H7M6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
ZSWIM4Q9H7M6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.64■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms