Protein–RNA interactions for Protein: Q9H0R4

HDHD2, Haloacid dehalogenase-like hydrolase domain-containing protein 2, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2Q9H0R4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.79■■□□□ 1.4
HDHD2Q9H0R4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
HDHD2Q9H0R4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
HDHD2Q9H0R4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HDHD2Q9H0R4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.78■■□□□ 1.4
HDHD2Q9H0R4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HDHD2Q9H0R4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HDHD2Q9H0R4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HDHD2Q9H0R4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HDHD2Q9H0R4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
HDHD2Q9H0R4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
HDHD2Q9H0R4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HDHD2Q9H0R4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.73■■□□□ 1.39
HDHD2Q9H0R4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.73■■□□□ 1.39
HDHD2Q9H0R4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.72■■□□□ 1.39
HDHD2Q9H0R4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
HDHD2Q9H0R4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HDHD2Q9H0R4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
HDHD2Q9H0R4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
HDHD2Q9H0R4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HDHD2Q9H0R4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
HDHD2Q9H0R4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.68■■□□□ 1.38
HDHD2Q9H0R4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HDHD2Q9H0R4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HDHD2Q9H0R4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HDHD2Q9H0R4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
HDHD2Q9H0R4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HDHD2Q9H0R4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HDHD2Q9H0R4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
HDHD2Q9H0R4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
HDHD2Q9H0R4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HDHD2Q9H0R4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
HDHD2Q9H0R4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HDHD2Q9H0R4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HDHD2Q9H0R4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HDHD2Q9H0R4 AL133380.1-201ENST00000506013 324 ntBASIC23.63■■□□□ 1.37
HDHD2Q9H0R4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.63■■□□□ 1.37
HDHD2Q9H0R4 RARRES2P7-201ENST00000567349 469 ntBASIC23.61■■□□□ 1.37
HDHD2Q9H0R4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HDHD2Q9H0R4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
HDHD2Q9H0R4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HDHD2Q9H0R4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.6■■□□□ 1.37
HDHD2Q9H0R4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HDHD2Q9H0R4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HDHD2Q9H0R4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HDHD2Q9H0R4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HDHD2Q9H0R4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
HDHD2Q9H0R4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
HDHD2Q9H0R4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HDHD2Q9H0R4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.57■■□□□ 1.36
HDHD2Q9H0R4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
HDHD2Q9H0R4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
HDHD2Q9H0R4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
HDHD2Q9H0R4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
HDHD2Q9H0R4 WASH5P-204ENST00000632292 975 ntBASIC23.54■■□□□ 1.36
HDHD2Q9H0R4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
HDHD2Q9H0R4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HDHD2Q9H0R4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HDHD2Q9H0R4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HDHD2Q9H0R4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HDHD2Q9H0R4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HDHD2Q9H0R4 SETD8P1-201ENST00000623146 1180 ntBASIC23.53■■□□□ 1.36
HDHD2Q9H0R4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
HDHD2Q9H0R4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDHD2Q9H0R4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
HDHD2Q9H0R4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDHD2Q9H0R4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDHD2Q9H0R4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDHD2Q9H0R4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.51■■□□□ 1.35
HDHD2Q9H0R4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HDHD2Q9H0R4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.51■■□□□ 1.35
HDHD2Q9H0R4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HDHD2Q9H0R4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
HDHD2Q9H0R4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HDHD2Q9H0R4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HDHD2Q9H0R4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HDHD2Q9H0R4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HDHD2Q9H0R4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
HDHD2Q9H0R4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HDHD2Q9H0R4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
HDHD2Q9H0R4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HDHD2Q9H0R4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HDHD2Q9H0R4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HDHD2Q9H0R4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HDHD2Q9H0R4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HDHD2Q9H0R4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
HDHD2Q9H0R4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HDHD2Q9H0R4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HDHD2Q9H0R4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HDHD2Q9H0R4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
HDHD2Q9H0R4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.45■■□□□ 1.34
HDHD2Q9H0R4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HDHD2Q9H0R4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HDHD2Q9H0R4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
HDHD2Q9H0R4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HDHD2Q9H0R4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HDHD2Q9H0R4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HDHD2Q9H0R4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
HDHD2Q9H0R4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HDHD2Q9H0R4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms