Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDRT4Q8N9R6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.8■■□□□ 1.56
CDRT4Q8N9R6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.8■■□□□ 1.56
CDRT4Q8N9R6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CDRT4Q8N9R6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDRT4Q8N9R6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.78■■□□□ 1.56
CDRT4Q8N9R6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CDRT4Q8N9R6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDRT4Q8N9R6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.78■■□□□ 1.56
CDRT4Q8N9R6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.78■■□□□ 1.56
CDRT4Q8N9R6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDRT4Q8N9R6 ABCB10P1-201ENST00000614297 2181 ntBASIC24.77■■□□□ 1.56
CDRT4Q8N9R6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDRT4Q8N9R6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDRT4Q8N9R6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CDRT4Q8N9R6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDRT4Q8N9R6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.73■■□□□ 1.55
CDRT4Q8N9R6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.73■■□□□ 1.55
CDRT4Q8N9R6 AL135925.1-201ENST00000605920 1701 ntBASIC24.72■■□□□ 1.55
CDRT4Q8N9R6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDRT4Q8N9R6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDRT4Q8N9R6 ST7-AS1-201ENST00000456775 1889 ntBASIC24.7■■□□□ 1.55
CDRT4Q8N9R6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDRT4Q8N9R6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDRT4Q8N9R6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDRT4Q8N9R6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDRT4Q8N9R6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.69■■□□□ 1.54
CDRT4Q8N9R6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.69■■□□□ 1.54
CDRT4Q8N9R6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDRT4Q8N9R6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDRT4Q8N9R6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDRT4Q8N9R6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDRT4Q8N9R6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.67■■□□□ 1.54
CDRT4Q8N9R6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDRT4Q8N9R6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDRT4Q8N9R6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDRT4Q8N9R6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDRT4Q8N9R6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDRT4Q8N9R6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CDRT4Q8N9R6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDRT4Q8N9R6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CDRT4Q8N9R6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDRT4Q8N9R6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
CDRT4Q8N9R6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDRT4Q8N9R6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.63■■□□□ 1.53
CDRT4Q8N9R6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDRT4Q8N9R6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CDRT4Q8N9R6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDRT4Q8N9R6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDRT4Q8N9R6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CDRT4Q8N9R6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDRT4Q8N9R6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDRT4Q8N9R6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDRT4Q8N9R6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.6■■□□□ 1.53
CDRT4Q8N9R6 SUZ12P1-203ENST00000578195 985 ntBASIC24.59■■□□□ 1.53
CDRT4Q8N9R6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDRT4Q8N9R6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDRT4Q8N9R6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CDRT4Q8N9R6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
CDRT4Q8N9R6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDRT4Q8N9R6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDRT4Q8N9R6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.57■■□□□ 1.52
CDRT4Q8N9R6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDRT4Q8N9R6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDRT4Q8N9R6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDRT4Q8N9R6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
CDRT4Q8N9R6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CDRT4Q8N9R6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.54■■□□□ 1.52
CDRT4Q8N9R6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
CDRT4Q8N9R6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDRT4Q8N9R6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDRT4Q8N9R6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDRT4Q8N9R6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDRT4Q8N9R6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDRT4Q8N9R6 AC010864.1-201ENST00000609407 1511 ntBASIC24.52■■□□□ 1.52
CDRT4Q8N9R6 MIR762-201ENST00000390236 83 ntBASIC24.52■■□□□ 1.52
CDRT4Q8N9R6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDRT4Q8N9R6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDRT4Q8N9R6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.51■■□□□ 1.51
CDRT4Q8N9R6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDRT4Q8N9R6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.5■■□□□ 1.51
CDRT4Q8N9R6 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.5■■□□□ 1.51
CDRT4Q8N9R6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDRT4Q8N9R6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDRT4Q8N9R6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDRT4Q8N9R6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDRT4Q8N9R6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDRT4Q8N9R6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CDRT4Q8N9R6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDRT4Q8N9R6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDRT4Q8N9R6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDRT4Q8N9R6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDRT4Q8N9R6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDRT4Q8N9R6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.47■■□□□ 1.51
CDRT4Q8N9R6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDRT4Q8N9R6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDRT4Q8N9R6 ABCB10P3-201ENST00000561950 2166 ntBASIC24.47■■□□□ 1.51
CDRT4Q8N9R6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CDRT4Q8N9R6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDRT4Q8N9R6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms