Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHRFAM7AQ494W8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CHRFAM7AQ494W8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.07■■□□□ 1.28
CHRFAM7AQ494W8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.06■■□□□ 1.28
CHRFAM7AQ494W8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHRFAM7AQ494W8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHRFAM7AQ494W8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.04■■□□□ 1.28
CHRFAM7AQ494W8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CHRFAM7AQ494W8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHRFAM7AQ494W8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHRFAM7AQ494W8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHRFAM7AQ494W8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHRFAM7AQ494W8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.01■■□□□ 1.27
CHRFAM7AQ494W8 AL133380.1-201ENST00000506013 324 ntBASIC23■■□□□ 1.27
CHRFAM7AQ494W8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHRFAM7AQ494W8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CHRFAM7AQ494W8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHRFAM7AQ494W8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.99■■□□□ 1.27
CHRFAM7AQ494W8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.99■■□□□ 1.27
CHRFAM7AQ494W8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHRFAM7AQ494W8 HLA-V-202ENST00000446817 847 ntBASIC22.98■■□□□ 1.27
CHRFAM7AQ494W8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CHRFAM7AQ494W8 ABCB10P3-201ENST00000561950 2166 ntBASIC22.98■■□□□ 1.27
CHRFAM7AQ494W8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
CHRFAM7AQ494W8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHRFAM7AQ494W8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.97■■□□□ 1.27
CHRFAM7AQ494W8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.97■■□□□ 1.27
CHRFAM7AQ494W8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
CHRFAM7AQ494W8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHRFAM7AQ494W8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHRFAM7AQ494W8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CHRFAM7AQ494W8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHRFAM7AQ494W8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHRFAM7AQ494W8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CHRFAM7AQ494W8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHRFAM7AQ494W8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHRFAM7AQ494W8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CHRFAM7AQ494W8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHRFAM7AQ494W8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHRFAM7AQ494W8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.92■■□□□ 1.26
CHRFAM7AQ494W8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHRFAM7AQ494W8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
CHRFAM7AQ494W8 AC044849.2-201ENST00000606596 710 ntBASIC22.91■■□□□ 1.26
CHRFAM7AQ494W8 AC087741.3-201ENST00000624270 1347 ntBASIC22.9■■□□□ 1.26
CHRFAM7AQ494W8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHRFAM7AQ494W8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.9■■□□□ 1.26
CHRFAM7AQ494W8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHRFAM7AQ494W8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHRFAM7AQ494W8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.9■■□□□ 1.26
CHRFAM7AQ494W8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHRFAM7AQ494W8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.88■■□□□ 1.25
CHRFAM7AQ494W8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRFAM7AQ494W8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRFAM7AQ494W8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CHRFAM7AQ494W8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.86■■□□□ 1.25
CHRFAM7AQ494W8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHRFAM7AQ494W8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRFAM7AQ494W8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CHRFAM7AQ494W8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRFAM7AQ494W8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
CHRFAM7AQ494W8 DUX4L28-201ENST00000623687 678 ntBASIC22.84■■□□□ 1.25
CHRFAM7AQ494W8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRFAM7AQ494W8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
CHRFAM7AQ494W8 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.83■■□□□ 1.25
CHRFAM7AQ494W8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.83■■□□□ 1.25
CHRFAM7AQ494W8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CHRFAM7AQ494W8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CHRFAM7AQ494W8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHRFAM7AQ494W8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.81■■□□□ 1.24
CHRFAM7AQ494W8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.8■■□□□ 1.24
CHRFAM7AQ494W8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.8■■□□□ 1.24
CHRFAM7AQ494W8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.8■■□□□ 1.24
CHRFAM7AQ494W8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRFAM7AQ494W8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRFAM7AQ494W8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRFAM7AQ494W8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHRFAM7AQ494W8 AC005559.1-201ENST00000589661 871 ntBASIC22.78■■□□□ 1.24
CHRFAM7AQ494W8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHRFAM7AQ494W8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHRFAM7AQ494W8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CHRFAM7AQ494W8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
CHRFAM7AQ494W8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CHRFAM7AQ494W8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.77■■□□□ 1.24
CHRFAM7AQ494W8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHRFAM7AQ494W8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CHRFAM7AQ494W8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHRFAM7AQ494W8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.76■■□□□ 1.23
CHRFAM7AQ494W8 MIR762-201ENST00000390236 83 ntBASIC22.76■■□□□ 1.23
CHRFAM7AQ494W8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHRFAM7AQ494W8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHRFAM7AQ494W8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.75■■□□□ 1.23
CHRFAM7AQ494W8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms