Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
GDF1P27539 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.25■■□□□ 1.47
GDF1P27539 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
GDF1P27539 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
GDF1P27539 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
GDF1P27539 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
GDF1P27539 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.23■■□□□ 1.47
GDF1P27539 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
GDF1P27539 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
GDF1P27539 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.22■■□□□ 1.47
GDF1P27539 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
GDF1P27539 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.21■■□□□ 1.47
GDF1P27539 AL161658.1-201ENST00000623641 1967 ntBASIC24.21■■□□□ 1.47
GDF1P27539 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.2■■□□□ 1.47
GDF1P27539 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
GDF1P27539 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
GDF1P27539 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.2■■□□□ 1.46
GDF1P27539 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
GDF1P27539 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
GDF1P27539 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
GDF1P27539 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.19■■□□□ 1.46
GDF1P27539 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.19■■□□□ 1.46
GDF1P27539 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GDF1P27539 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GDF1P27539 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
GDF1P27539 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
GDF1P27539 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
GDF1P27539 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
GDF1P27539 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
GDF1P27539 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.15■■□□□ 1.46
GDF1P27539 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
GDF1P27539 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GDF1P27539 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GDF1P27539 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
GDF1P27539 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GDF1P27539 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.12■■□□□ 1.45
GDF1P27539 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.12■■□□□ 1.45
GDF1P27539 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.12■■□□□ 1.45
GDF1P27539 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
GDF1P27539 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
GDF1P27539 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
GDF1P27539 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
GDF1P27539 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
GDF1P27539 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GDF1P27539 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
GDF1P27539 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
GDF1P27539 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
GDF1P27539 AC108673.1-201ENST00000510422 1159 ntBASIC24.09■■□□□ 1.45
GDF1P27539 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
GDF1P27539 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
GDF1P27539 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.08■■□□□ 1.45
GDF1P27539 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
GDF1P27539 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
GDF1P27539 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
GDF1P27539 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.06■■□□□ 1.44
GDF1P27539 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.06■■□□□ 1.44
GDF1P27539 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.06■■□□□ 1.44
GDF1P27539 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.06■■□□□ 1.44
GDF1P27539 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
GDF1P27539 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.05■■□□□ 1.44
GDF1P27539 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
GDF1P27539 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
GDF1P27539 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
GDF1P27539 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
GDF1P27539 ABHD17AP4-201ENST00000411545 909 ntBASIC24.04■■□□□ 1.44
GDF1P27539 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.04■■□□□ 1.44
GDF1P27539 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
GDF1P27539 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
GDF1P27539 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GDF1P27539 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.03■■□□□ 1.44
GDF1P27539 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
GDF1P27539 MIR6090-201ENST00000622481 60 ntBASIC24.02■■□□□ 1.44
GDF1P27539 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
GDF1P27539 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
GDF1P27539 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
GDF1P27539 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
GDF1P27539 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.01■■□□□ 1.43
GDF1P27539 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
GDF1P27539 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
GDF1P27539 DUX4L29-201ENST00000425409 679 ntBASIC24■■□□□ 1.43
GDF1P27539 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24■■□□□ 1.43
GDF1P27539 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
GDF1P27539 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
GDF1P27539 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
GDF1P27539 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
GDF1P27539 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
GDF1P27539 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
GDF1P27539 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
GDF1P27539 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
GDF1P27539 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.96■■□□□ 1.43
GDF1P27539 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.96■■□□□ 1.43
GDF1P27539 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.95■■□□□ 1.43
GDF1P27539 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
GDF1P27539 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.95■■□□□ 1.42
GDF1P27539 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
GDF1P27539 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
GDF1P27539 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.94■■□□□ 1.42
GDF1P27539 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
GDF1P27539 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
GDF1P27539 MIR7108-201ENST00000614319 87 ntBASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms