Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
SSC5DA1L4H1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32■■■□□ 2.71
SSC5DA1L4H1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32■■■□□ 2.71
SSC5DA1L4H1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SSC5DA1L4H1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.99■■■□□ 2.71
SSC5DA1L4H1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.99■■■□□ 2.71
SSC5DA1L4H1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SSC5DA1L4H1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SSC5DA1L4H1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
SSC5DA1L4H1 AC108673.1-201ENST00000510422 1159 ntBASIC31.97■■■□□ 2.71
SSC5DA1L4H1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.97■■■□□ 2.71
SSC5DA1L4H1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SSC5DA1L4H1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
SSC5DA1L4H1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
SSC5DA1L4H1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SSC5DA1L4H1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.94■■■□□ 2.7
SSC5DA1L4H1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SSC5DA1L4H1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.93■■■□□ 2.7
SSC5DA1L4H1 HSD17B1P1-201ENST00000590052 955 ntBASIC31.93■■■□□ 2.7
SSC5DA1L4H1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SSC5DA1L4H1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
SSC5DA1L4H1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
SSC5DA1L4H1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.9■■■□□ 2.7
SSC5DA1L4H1 DUX4L11-201ENST00000611504 1267 ntBASIC31.9■■■□□ 2.7
SSC5DA1L4H1 DUX4L12-201ENST00000614593 1267 ntBASIC31.9■■■□□ 2.7
SSC5DA1L4H1 DUX4L14-201ENST00000621227 1267 ntBASIC31.9■■■□□ 2.7
SSC5DA1L4H1 LINC01971-201ENST00000617888 1048 ntBASIC31.89■■■□□ 2.7
SSC5DA1L4H1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.88■■■□□ 2.69
SSC5DA1L4H1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SSC5DA1L4H1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SSC5DA1L4H1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.87■■■□□ 2.69
SSC5DA1L4H1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.86■■■□□ 2.69
SSC5DA1L4H1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.86■■■□□ 2.69
SSC5DA1L4H1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.85■■■□□ 2.69
SSC5DA1L4H1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SSC5DA1L4H1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SSC5DA1L4H1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SSC5DA1L4H1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SSC5DA1L4H1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SSC5DA1L4H1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SSC5DA1L4H1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
SSC5DA1L4H1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SSC5DA1L4H1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SSC5DA1L4H1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.81■■■□□ 2.68
SSC5DA1L4H1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SSC5DA1L4H1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SSC5DA1L4H1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SSC5DA1L4H1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.79■■■□□ 2.68
SSC5DA1L4H1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
SSC5DA1L4H1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
SSC5DA1L4H1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
SSC5DA1L4H1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.77■■■□□ 2.68
SSC5DA1L4H1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.76■■■□□ 2.68
SSC5DA1L4H1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SSC5DA1L4H1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
SSC5DA1L4H1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
SSC5DA1L4H1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SSC5DA1L4H1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SSC5DA1L4H1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SSC5DA1L4H1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.75■■■□□ 2.67
SSC5DA1L4H1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SSC5DA1L4H1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SSC5DA1L4H1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SSC5DA1L4H1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.68■■■□□ 2.66
SSC5DA1L4H1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SSC5DA1L4H1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.68■■■□□ 2.66
SSC5DA1L4H1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SSC5DA1L4H1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.67■■■□□ 2.66
SSC5DA1L4H1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SSC5DA1L4H1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SSC5DA1L4H1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.66■■■□□ 2.66
SSC5DA1L4H1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
SSC5DA1L4H1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SSC5DA1L4H1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SSC5DA1L4H1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
SSC5DA1L4H1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.63■■■□□ 2.65
SSC5DA1L4H1 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.63■■■□□ 2.65
SSC5DA1L4H1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SSC5DA1L4H1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SSC5DA1L4H1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
SSC5DA1L4H1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SSC5DA1L4H1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SSC5DA1L4H1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SSC5DA1L4H1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.59■■■□□ 2.65
SSC5DA1L4H1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.59■■■□□ 2.65
SSC5DA1L4H1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SSC5DA1L4H1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SSC5DA1L4H1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SSC5DA1L4H1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.57■■■□□ 2.64
SSC5DA1L4H1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SSC5DA1L4H1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
SSC5DA1L4H1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SSC5DA1L4H1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.56■■■□□ 2.64
SSC5DA1L4H1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.56■■■□□ 2.64
SSC5DA1L4H1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.56■■■□□ 2.64
SSC5DA1L4H1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SSC5DA1L4H1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.55■■■□□ 2.64
SSC5DA1L4H1 DUX4L13-201ENST00000554103 1267 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 DUX4L15-201ENST00000611059 1267 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 DUX4L23-201ENST00000615195 1269 ntBASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms