Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.57■■□□□ 1.36
TRDV1A0A1B0GX56 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
TRDV1A0A1B0GX56 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TRDV1A0A1B0GX56 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
TRDV1A0A1B0GX56 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRDV1A0A1B0GX56 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRDV1A0A1B0GX56 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRDV1A0A1B0GX56 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TRDV1A0A1B0GX56 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRDV1A0A1B0GX56 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRDV1A0A1B0GX56 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRDV1A0A1B0GX56 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.54■■□□□ 1.36
TRDV1A0A1B0GX56 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRDV1A0A1B0GX56 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRDV1A0A1B0GX56 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRDV1A0A1B0GX56 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRDV1A0A1B0GX56 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRDV1A0A1B0GX56 AL135925.1-201ENST00000605920 1701 ntBASIC23.52■■□□□ 1.36
TRDV1A0A1B0GX56 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
TRDV1A0A1B0GX56 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRDV1A0A1B0GX56 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRDV1A0A1B0GX56 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRDV1A0A1B0GX56 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRDV1A0A1B0GX56 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRDV1A0A1B0GX56 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRDV1A0A1B0GX56 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRDV1A0A1B0GX56 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
TRDV1A0A1B0GX56 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.46■■□□□ 1.35
TRDV1A0A1B0GX56 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TRDV1A0A1B0GX56 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.45■■□□□ 1.34
TRDV1A0A1B0GX56 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRDV1A0A1B0GX56 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRDV1A0A1B0GX56 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRDV1A0A1B0GX56 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRDV1A0A1B0GX56 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRDV1A0A1B0GX56 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC23.43■■□□□ 1.34
TRDV1A0A1B0GX56 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRDV1A0A1B0GX56 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRDV1A0A1B0GX56 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRDV1A0A1B0GX56 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRDV1A0A1B0GX56 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRDV1A0A1B0GX56 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.41■■□□□ 1.34
TRDV1A0A1B0GX56 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRDV1A0A1B0GX56 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRDV1A0A1B0GX56 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.38■■□□□ 1.33
TRDV1A0A1B0GX56 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRDV1A0A1B0GX56 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRDV1A0A1B0GX56 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRDV1A0A1B0GX56 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
TRDV1A0A1B0GX56 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRDV1A0A1B0GX56 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRDV1A0A1B0GX56 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
TRDV1A0A1B0GX56 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRDV1A0A1B0GX56 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRDV1A0A1B0GX56 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
TRDV1A0A1B0GX56 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRDV1A0A1B0GX56 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRDV1A0A1B0GX56 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRDV1A0A1B0GX56 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TRDV1A0A1B0GX56 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRDV1A0A1B0GX56 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRDV1A0A1B0GX56 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRDV1A0A1B0GX56 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRDV1A0A1B0GX56 AL121749.1-202ENST00000609313 2153 ntBASIC23.31■■□□□ 1.32
TRDV1A0A1B0GX56 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRDV1A0A1B0GX56 DRD5P2-201ENST00000421395 2012 ntBASIC23.3■■□□□ 1.32
TRDV1A0A1B0GX56 AL139393.2-201ENST00000608721 2025 ntBASIC23.3■■□□□ 1.32
TRDV1A0A1B0GX56 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.3■■□□□ 1.32
TRDV1A0A1B0GX56 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.3■■□□□ 1.32
TRDV1A0A1B0GX56 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRDV1A0A1B0GX56 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRDV1A0A1B0GX56 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRDV1A0A1B0GX56 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRDV1A0A1B0GX56 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRDV1A0A1B0GX56 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TRDV1A0A1B0GX56 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TRDV1A0A1B0GX56 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRDV1A0A1B0GX56 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TRDV1A0A1B0GX56 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRDV1A0A1B0GX56 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
TRDV1A0A1B0GX56 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRDV1A0A1B0GX56 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRDV1A0A1B0GX56 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TRDV1A0A1B0GX56 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRDV1A0A1B0GX56 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRDV1A0A1B0GX56 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRDV1A0A1B0GX56 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRDV1A0A1B0GX56 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRDV1A0A1B0GX56 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.23■■□□□ 1.31
TRDV1A0A1B0GX56 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRDV1A0A1B0GX56 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRDV1A0A1B0GX56 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRDV1A0A1B0GX56 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.21■■□□□ 1.31
TRDV1A0A1B0GX56 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRDV1A0A1B0GX56 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRDV1A0A1B0GX56 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.2■■□□□ 1.3
TRDV1A0A1B0GX56 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRDV1A0A1B0GX56 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.2■■□□□ 1.3
TRDV1A0A1B0GX56 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRDV1A0A1B0GX56 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms