Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV8-4A0A0B4J246 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-4A0A0B4J246 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV8-4A0A0B4J246 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV8-4A0A0B4J246 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-4A0A0B4J246 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-4A0A0B4J246 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-4A0A0B4J246 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAV8-4A0A0B4J246 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-4A0A0B4J246 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-4A0A0B4J246 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-4A0A0B4J246 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-4A0A0B4J246 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV8-4A0A0B4J246 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAV8-4A0A0B4J246 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-4A0A0B4J246 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-4A0A0B4J246 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV8-4A0A0B4J246 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-4A0A0B4J246 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-4A0A0B4J246 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-4A0A0B4J246 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV8-4A0A0B4J246 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV8-4A0A0B4J246 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-4A0A0B4J246 ABCB10P3-201ENST00000561950 2166 ntBASIC18.29■□□□□ 0.52
TRAV8-4A0A0B4J246 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV8-4A0A0B4J246 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-4A0A0B4J246 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-4A0A0B4J246 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-4A0A0B4J246 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV8-4A0A0B4J246 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-4A0A0B4J246 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV8-4A0A0B4J246 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-4A0A0B4J246 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV8-4A0A0B4J246 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV8-4A0A0B4J246 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-4A0A0B4J246 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV8-4A0A0B4J246 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-4A0A0B4J246 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-4A0A0B4J246 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV8-4A0A0B4J246 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-4A0A0B4J246 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV8-4A0A0B4J246 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-4A0A0B4J246 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV8-4A0A0B4J246 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TRAV8-4A0A0B4J246 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRAV8-4A0A0B4J246 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-4A0A0B4J246 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV8-4A0A0B4J246 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-4A0A0B4J246 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-4A0A0B4J246 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV8-4A0A0B4J246 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV8-4A0A0B4J246 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-4A0A0B4J246 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-4A0A0B4J246 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-4A0A0B4J246 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV8-4A0A0B4J246 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-4A0A0B4J246 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-4A0A0B4J246 ABCB10P1-201ENST00000614297 2181 ntBASIC18.17■□□□□ 0.5
TRAV8-4A0A0B4J246 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-4A0A0B4J246 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV8-4A0A0B4J246 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-4A0A0B4J246 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-4A0A0B4J246 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-4A0A0B4J246 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-4A0A0B4J246 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV8-4A0A0B4J246 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TRAV8-4A0A0B4J246 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-4A0A0B4J246 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-4A0A0B4J246 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV8-4A0A0B4J246 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TRAV8-4A0A0B4J246 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-4A0A0B4J246 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV8-4A0A0B4J246 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-4A0A0B4J246 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-4A0A0B4J246 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-4A0A0B4J246 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-4A0A0B4J246 AL133380.1-201ENST00000506013 324 ntBASIC18.11■□□□□ 0.49
TRAV8-4A0A0B4J246 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAV8-4A0A0B4J246 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-4A0A0B4J246 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-4A0A0B4J246 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAV8-4A0A0B4J246 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-4A0A0B4J246 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV8-4A0A0B4J246 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-4A0A0B4J246 RARRES2P7-201ENST00000567349 469 ntBASIC18.1■□□□□ 0.49
TRAV8-4A0A0B4J246 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-4A0A0B4J246 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-4A0A0B4J246 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV8-4A0A0B4J246 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TRAV8-4A0A0B4J246 WASH5P-204ENST00000632292 975 ntBASIC18.09■□□□□ 0.49
TRAV8-4A0A0B4J246 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-4A0A0B4J246 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms