Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV2A0A0B4J234 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV2A0A0B4J234 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV2A0A0B4J234 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAV2A0A0B4J234 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRAV2A0A0B4J234 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV2A0A0B4J234 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV2A0A0B4J234 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV2A0A0B4J234 SUZ12P1-203ENST00000578195 985 ntBASIC20.02■□□□□ 0.8
TRAV2A0A0B4J234 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV2A0A0B4J234 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV2A0A0B4J234 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV2A0A0B4J234 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV2A0A0B4J234 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV2A0A0B4J234 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV2A0A0B4J234 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV2A0A0B4J234 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV2A0A0B4J234 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV2A0A0B4J234 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV2A0A0B4J234 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV2A0A0B4J234 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV2A0A0B4J234 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV2A0A0B4J234 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV2A0A0B4J234 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV2A0A0B4J234 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV2A0A0B4J234 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRAV2A0A0B4J234 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV2A0A0B4J234 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV2A0A0B4J234 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.94■□□□□ 0.78
TRAV2A0A0B4J234 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAV2A0A0B4J234 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV2A0A0B4J234 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV2A0A0B4J234 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV2A0A0B4J234 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.93■□□□□ 0.78
TRAV2A0A0B4J234 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRAV2A0A0B4J234 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV2A0A0B4J234 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV2A0A0B4J234 MIR762-201ENST00000390236 83 ntBASIC19.91■□□□□ 0.78
TRAV2A0A0B4J234 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV2A0A0B4J234 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV2A0A0B4J234 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV2A0A0B4J234 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV2A0A0B4J234 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV2A0A0B4J234 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRAV2A0A0B4J234 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV2A0A0B4J234 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV2A0A0B4J234 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV2A0A0B4J234 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV2A0A0B4J234 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.87■□□□□ 0.77
TRAV2A0A0B4J234 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV2A0A0B4J234 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAV2A0A0B4J234 AP006261.1-201ENST00000584783 668 ntBASIC19.86■□□□□ 0.77
TRAV2A0A0B4J234 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV2A0A0B4J234 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV2A0A0B4J234 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAV2A0A0B4J234 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAV2A0A0B4J234 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV2A0A0B4J234 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRAV2A0A0B4J234 AL135925.1-201ENST00000605920 1701 ntBASIC19.85■□□□□ 0.77
TRAV2A0A0B4J234 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV2A0A0B4J234 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRAV2A0A0B4J234 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV2A0A0B4J234 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV2A0A0B4J234 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV2A0A0B4J234 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
TRAV2A0A0B4J234 AC005559.1-201ENST00000589661 871 ntBASIC19.83■□□□□ 0.77
TRAV2A0A0B4J234 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV2A0A0B4J234 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV2A0A0B4J234 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAV2A0A0B4J234 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV2A0A0B4J234 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV2A0A0B4J234 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV2A0A0B4J234 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV2A0A0B4J234 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAV2A0A0B4J234 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV2A0A0B4J234 MIR3665-201ENST00000578708 105 ntBASIC19.8■□□□□ 0.76
TRAV2A0A0B4J234 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV2A0A0B4J234 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV2A0A0B4J234 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV2A0A0B4J234 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRAV2A0A0B4J234 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV2A0A0B4J234 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV2A0A0B4J234 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV2A0A0B4J234 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV2A0A0B4J234 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAV2A0A0B4J234 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV2A0A0B4J234 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV2A0A0B4J234 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV2A0A0B4J234 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV2A0A0B4J234 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV2A0A0B4J234 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRAV2A0A0B4J234 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV2A0A0B4J234 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms