Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 AC136428.2-201ENST00000563187 214 ntBASIC21.05■□□□□ 0.96
TRBV9A0A0B4J1U6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.05■□□□□ 0.96
TRBV9A0A0B4J1U6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV9A0A0B4J1U6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV9A0A0B4J1U6 AC097358.2-201ENST00000607541 1159 ntBASIC21.03■□□□□ 0.96
TRBV9A0A0B4J1U6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV9A0A0B4J1U6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.02■□□□□ 0.96
TRBV9A0A0B4J1U6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV9A0A0B4J1U6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV9A0A0B4J1U6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV9A0A0B4J1U6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV9A0A0B4J1U6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV9A0A0B4J1U6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRBV9A0A0B4J1U6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV9A0A0B4J1U6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRBV9A0A0B4J1U6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV9A0A0B4J1U6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TRBV9A0A0B4J1U6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV9A0A0B4J1U6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV9A0A0B4J1U6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV9A0A0B4J1U6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
TRBV9A0A0B4J1U6 AL391121.1-201ENST00000607967 1349 ntBASIC20.97■□□□□ 0.95
TRBV9A0A0B4J1U6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV9A0A0B4J1U6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBV9A0A0B4J1U6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBV9A0A0B4J1U6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRBV9A0A0B4J1U6 CAHM-201ENST00000604200 896 ntBASIC20.96■□□□□ 0.95
TRBV9A0A0B4J1U6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.95■□□□□ 0.94
TRBV9A0A0B4J1U6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TRBV9A0A0B4J1U6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV9A0A0B4J1U6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV9A0A0B4J1U6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV9A0A0B4J1U6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV9A0A0B4J1U6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV9A0A0B4J1U6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.94■□□□□ 0.94
TRBV9A0A0B4J1U6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV9A0A0B4J1U6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV9A0A0B4J1U6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRBV9A0A0B4J1U6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV9A0A0B4J1U6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRBV9A0A0B4J1U6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV9A0A0B4J1U6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV9A0A0B4J1U6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV9A0A0B4J1U6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV9A0A0B4J1U6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.91■□□□□ 0.94
TRBV9A0A0B4J1U6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRBV9A0A0B4J1U6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRBV9A0A0B4J1U6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV9A0A0B4J1U6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV9A0A0B4J1U6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.9■□□□□ 0.94
TRBV9A0A0B4J1U6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TRBV9A0A0B4J1U6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV9A0A0B4J1U6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV9A0A0B4J1U6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV9A0A0B4J1U6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV9A0A0B4J1U6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV9A0A0B4J1U6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV9A0A0B4J1U6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.87■□□□□ 0.93
TRBV9A0A0B4J1U6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV9A0A0B4J1U6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRBV9A0A0B4J1U6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.86■□□□□ 0.93
TRBV9A0A0B4J1U6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV9A0A0B4J1U6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRBV9A0A0B4J1U6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBV9A0A0B4J1U6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.84■□□□□ 0.93
TRBV9A0A0B4J1U6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV9A0A0B4J1U6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.83■□□□□ 0.93
TRBV9A0A0B4J1U6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV9A0A0B4J1U6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TRBV9A0A0B4J1U6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV9A0A0B4J1U6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV9A0A0B4J1U6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV9A0A0B4J1U6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV9A0A0B4J1U6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRBV9A0A0B4J1U6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.81■□□□□ 0.92
TRBV9A0A0B4J1U6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV9A0A0B4J1U6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV9A0A0B4J1U6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRBV9A0A0B4J1U6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV9A0A0B4J1U6 SUZ12P1-203ENST00000578195 985 ntBASIC20.79■□□□□ 0.92
TRBV9A0A0B4J1U6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.79■□□□□ 0.92
TRBV9A0A0B4J1U6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV9A0A0B4J1U6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV9A0A0B4J1U6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV9A0A0B4J1U6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV9A0A0B4J1U6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV9A0A0B4J1U6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV9A0A0B4J1U6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV9A0A0B4J1U6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV9A0A0B4J1U6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV9A0A0B4J1U6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TRBV9A0A0B4J1U6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV9A0A0B4J1U6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms