Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TRAV8-3A0A0A6YYJ7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 RARRES2P7-201ENST00000567349 469 ntBASIC18.61■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV8-3A0A0A6YYJ7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.57■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-3A0A0A6YYJ7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 SETD8P1-201ENST00000623146 1180 ntBASIC18.48■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-3A0A0A6YYJ7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-3A0A0A6YYJ7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 AL133380.1-201ENST00000506013 324 ntBASIC18.39■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 ST7-AS1-201ENST00000456775 1889 ntBASIC18.39■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 AC097358.2-201ENST00000607541 1159 ntBASIC18.36■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms