Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDHD3Q9BSH5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDHD3Q9BSH5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.71■□□□□ 0.43
HDHD3Q9BSH5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HDHD3Q9BSH5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HDHD3Q9BSH5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 SMUG1P1-201ENST00000590640 811 ntBASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 PLK5-205ENST00000642079 1969 ntBASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDHD3Q9BSH5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
HDHD3Q9BSH5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.67■□□□□ 0.42
HDHD3Q9BSH5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms