Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf40Q86WS4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 RARRES2P4-201ENST00000514074 484 ntBASIC21.47■■□□□ 1.03
C12orf40Q86WS4 RNA5SP413-201ENST00000516373 109 ntBASIC21.47■■□□□ 1.03
C12orf40Q86WS4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 C11orf96-202ENST00000528572 1834 ntBASIC21.47■■□□□ 1.03
C12orf40Q86WS4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
C12orf40Q86WS4 AC010980.2-201ENST00000587099 1412 ntBASIC21.46■■□□□ 1.03
C12orf40Q86WS4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 AL162412.1-201ENST00000567129 965 ntBASIC21.46■■□□□ 1.03
C12orf40Q86WS4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 AC083880.1-201ENST00000608266 535 ntBASIC21.46■■□□□ 1.03
C12orf40Q86WS4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf40Q86WS4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.03
C12orf40Q86WS4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.45■■□□□ 1.02
C12orf40Q86WS4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 AC068473.5-201ENST00000616428 2072 ntBASIC21.44■■□□□ 1.02
C12orf40Q86WS4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf40Q86WS4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 MYC-209ENST00000641252 345 ntBASIC21.43■■□□□ 1.02
C12orf40Q86WS4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.43■■□□□ 1.02
C12orf40Q86WS4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
C12orf40Q86WS4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
C12orf40Q86WS4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
C12orf40Q86WS4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
C12orf40Q86WS4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms