Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST2H3AQ71DI3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST2H3AQ71DI3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 AC027612.3-201ENST00000413684 1047 ntBASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 EEF1DP3-203ENST00000566025 782 ntBASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 MIR6084-201ENST00000622012 110 ntBASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST2H3AQ71DI3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST2H3AQ71DI3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 AC053503.5-201ENST00000601508 636 ntBASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST2H3AQ71DI3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 AF106564.1-201ENST00000607058 2553 ntBASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST2H3AQ71DI3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 AL049796.1-201ENST00000565336 1766 ntBASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST2H3AQ71DI3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H3AQ71DI3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms