Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PACS1Q6VY07 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PACS1Q6VY07 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PACS1Q6VY07 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
PACS1Q6VY07 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PACS1Q6VY07 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PACS1Q6VY07 AC009237.3-201ENST00000393279 1427 ntBASIC21.21■□□□□ 0.99
PACS1Q6VY07 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.2■□□□□ 0.99
PACS1Q6VY07 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS1Q6VY07 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PACS1Q6VY07 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.2■□□□□ 0.98
PACS1Q6VY07 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.2■□□□□ 0.98
PACS1Q6VY07 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.2■□□□□ 0.98
PACS1Q6VY07 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PACS1Q6VY07 AL157384.1-201ENST00000445995 2473 ntBASIC21.2■□□□□ 0.98
PACS1Q6VY07 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS1Q6VY07 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PACS1Q6VY07 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS1Q6VY07 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PACS1Q6VY07 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS1Q6VY07 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS1Q6VY07 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS1Q6VY07 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.19■□□□□ 0.98
PACS1Q6VY07 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PACS1Q6VY07 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.19■□□□□ 0.98
PACS1Q6VY07 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.19■□□□□ 0.98
PACS1Q6VY07 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.19■□□□□ 0.98
PACS1Q6VY07 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS1Q6VY07 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PACS1Q6VY07 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PACS1Q6VY07 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.18■□□□□ 0.98
PACS1Q6VY07 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.18■□□□□ 0.98
PACS1Q6VY07 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PACS1Q6VY07 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.18■□□□□ 0.98
PACS1Q6VY07 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.18■□□□□ 0.98
PACS1Q6VY07 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.18■□□□□ 0.98
PACS1Q6VY07 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS1Q6VY07 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 AC073130.3-201ENST00000624389 2278 ntBASIC21.17■□□□□ 0.98
PACS1Q6VY07 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PACS1Q6VY07 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.17■□□□□ 0.98
PACS1Q6VY07 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.17■□□□□ 0.98
PACS1Q6VY07 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS1Q6VY07 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PACS1Q6VY07 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 AC027612.3-201ENST00000413684 1047 ntBASIC21.16■□□□□ 0.98
PACS1Q6VY07 ZNRF2P3-201ENST00000424200 374 ntBASIC21.16■□□□□ 0.98
PACS1Q6VY07 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.16■□□□□ 0.98
PACS1Q6VY07 TPRG1LP1-201ENST00000598702 760 ntBASIC21.16■□□□□ 0.98
PACS1Q6VY07 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.16■□□□□ 0.98
PACS1Q6VY07 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PACS1Q6VY07 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS1Q6VY07 AC005224.4-201ENST00000583262 1652 ntBASIC21.15■□□□□ 0.98
PACS1Q6VY07 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PACS1Q6VY07 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.15■□□□□ 0.98
PACS1Q6VY07 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS1Q6VY07 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS1Q6VY07 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PACS1Q6VY07 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PACS1Q6VY07 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
PACS1Q6VY07 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS1Q6VY07 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS1Q6VY07 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PACS1Q6VY07 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
PACS1Q6VY07 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PACS1Q6VY07 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PACS1Q6VY07 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PACS1Q6VY07 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PACS1Q6VY07 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PACS1Q6VY07 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms