Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.83■□□□□ 0.77
RUNDC3AQ59EK9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.83■□□□□ 0.76
RUNDC3AQ59EK9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 AP005212.1-201ENST00000581547 1997 ntBASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RUNDC3AQ59EK9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RUNDC3AQ59EK9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 AL356441.2-201ENST00000443009 864 ntBASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 AC133561.4-201ENST00000566112 224 ntBASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RUNDC3AQ59EK9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 AC073314.1-201ENST00000568729 2216 ntBASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RUNDC3AQ59EK9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms