Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH7O60245 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDH7O60245 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.07■□□□□ 0.8
PCDH7O60245 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.07■□□□□ 0.8
PCDH7O60245 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH7O60245 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH7O60245 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH7O60245 AL358852.1-201ENST00000623174 1268 ntBASIC20.07■□□□□ 0.8
PCDH7O60245 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH7O60245 AL049796.1-201ENST00000565336 1766 ntBASIC20.07■□□□□ 0.8
PCDH7O60245 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH7O60245 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH7O60245 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH7O60245 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH7O60245 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH7O60245 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 AC105265.2-201ENST00000467189 838 ntBASIC20.06■□□□□ 0.8
PCDH7O60245 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDH7O60245 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH7O60245 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH7O60245 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH7O60245 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH7O60245 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH7O60245 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH7O60245 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH7O60245 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDH7O60245 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PCDH7O60245 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDH7O60245 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH7O60245 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH7O60245 TPRG1LP1-201ENST00000598702 760 ntBASIC20.05■□□□□ 0.8
PCDH7O60245 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH7O60245 MIR6084-201ENST00000622012 110 ntBASIC20.05■□□□□ 0.8
PCDH7O60245 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH7O60245 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH7O60245 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH7O60245 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH7O60245 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH7O60245 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH7O60245 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PCDH7O60245 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH7O60245 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH7O60245 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH7O60245 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH7O60245 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH7O60245 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH7O60245 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH7O60245 MIR638-201ENST00000385237 100 ntBASIC20.04■□□□□ 0.8
PCDH7O60245 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH7O60245 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH7O60245 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH7O60245 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH7O60245 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDH7O60245 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
PCDH7O60245 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH7O60245 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDH7O60245 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH7O60245 IRS3P-201ENST00000223076 1006 ntBASIC20.03■□□□□ 0.8
PCDH7O60245 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDH7O60245 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH7O60245 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH7O60245 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH7O60245 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH7O60245 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH7O60245 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH7O60245 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH7O60245 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH7O60245 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH7O60245 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH7O60245 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH7O60245 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH7O60245 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH7O60245 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH7O60245 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH7O60245 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH7O60245 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDH7O60245 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH7O60245 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDH7O60245 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH7O60245 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDH7O60245 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH7O60245 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH7O60245 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH7O60245 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH7O60245 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms