Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDHDO14521 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SDHDO14521 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHDO14521 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SDHDO14521 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.31■□□□□ 0.84
SDHDO14521 AC011298.3-201ENST00000615796 283 ntBASIC20.31■□□□□ 0.84
SDHDO14521 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHDO14521 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SDHDO14521 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.3■□□□□ 0.84
SDHDO14521 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.3■□□□□ 0.84
SDHDO14521 SMUG1P1-201ENST00000590640 811 ntBASIC20.3■□□□□ 0.84
SDHDO14521 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.3■□□□□ 0.84
SDHDO14521 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHDO14521 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SDHDO14521 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SDHDO14521 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.29■□□□□ 0.84
SDHDO14521 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.29■□□□□ 0.84
SDHDO14521 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.29■□□□□ 0.84
SDHDO14521 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.29■□□□□ 0.84
SDHDO14521 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
SDHDO14521 DUX4L19-201ENST00000557448 1267 ntBASIC20.29■□□□□ 0.84
SDHDO14521 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.29■□□□□ 0.84
SDHDO14521 MIR4466-201ENST00000606121 54 ntBASIC20.29■□□□□ 0.84
SDHDO14521 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SDHDO14521 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHDO14521 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.28■□□□□ 0.84
SDHDO14521 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.28■□□□□ 0.84
SDHDO14521 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SDHDO14521 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
SDHDO14521 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.28■□□□□ 0.84
SDHDO14521 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SDHDO14521 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.28■□□□□ 0.84
SDHDO14521 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHDO14521 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.28■□□□□ 0.84
SDHDO14521 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDHDO14521 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SDHDO14521 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDHDO14521 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SDHDO14521 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.27■□□□□ 0.84
SDHDO14521 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SDHDO14521 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.27■□□□□ 0.84
SDHDO14521 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SDHDO14521 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SDHDO14521 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SDHDO14521 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SDHDO14521 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SDHDO14521 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
SDHDO14521 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SDHDO14521 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHDO14521 AC027702.1-201ENST00000563810 1770 ntBASIC20.26■□□□□ 0.83
SDHDO14521 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SDHDO14521 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
SDHDO14521 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.26■□□□□ 0.83
SDHDO14521 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDHDO14521 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SDHDO14521 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.26■□□□□ 0.83
SDHDO14521 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDHDO14521 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.26■□□□□ 0.83
SDHDO14521 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDHDO14521 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.26■□□□□ 0.83
SDHDO14521 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.26■□□□□ 0.83
SDHDO14521 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.26■□□□□ 0.83
SDHDO14521 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms