Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-2A0A0B4J235 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 REST-206ENST00000612429 1376 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 REST-207ENST00000616975 1370 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-2A0A0B4J235 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 DUX4L4-201ENST00000566884 1269 ntBASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-2A0A0B4J235 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-2A0A0B4J235 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms