Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.18
PCDHB18PQ96TA0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PCDHB18PQ96TA0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
PCDHB18PQ96TA0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 IRS3P-201ENST00000223076 1006 ntBASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 AL358852.1-201ENST00000623174 1268 ntBASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB18PQ96TA0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB18PQ96TA0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB18PQ96TA0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB18PQ96TA0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 EEF1DP3-203ENST00000566025 782 ntBASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB18PQ96TA0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB18PQ96TA0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB18PQ96TA0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
PCDHB18PQ96TA0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB18PQ96TA0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB18PQ96TA0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB18PQ96TA0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PCDHB18PQ96TA0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB18PQ96TA0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHB18PQ96TA0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHB18PQ96TA0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDHB18PQ96TA0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms