Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A4EQ96PG1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A4EQ96PG1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 AF106564.1-201ENST00000607058 2553 ntBASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A4EQ96PG1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MS4A4EQ96PG1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
MS4A4EQ96PG1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 AC079140.4-201ENST00000507448 529 ntBASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 EEF1DP3-203ENST00000566025 782 ntBASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 AC053503.5-201ENST00000601508 636 ntBASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MS4A4EQ96PG1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 KRT87P-202ENST00000534226 1464 ntBASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 LINC02228-203ENST00000641970 1355 ntBASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.63■□□□□ 0.73
MS4A4EQ96PG1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms