Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 MIR6765-201ENST00000614092 87 ntBASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CROCCP3Q8IVE0 AC022616.5-201ENST00000518796 181 ntBASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 AC005082.1-201ENST00000413042 2259 ntBASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.08■□□□□ 0.64
CROCCP3Q8IVE0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 LINC01960-201ENST00000563759 1884 ntBASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
CROCCP3Q8IVE0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 AC004448.1-201ENST00000458332 883 ntBASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CROCCP3Q8IVE0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CROCCP3Q8IVE0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 AC004408.2-201ENST00000623613 2777 ntBASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 MIR639-201ENST00000384974 98 ntBASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms