Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM6P62312 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.53■□□□□ 0.56
LSM6P62312 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LSM6P62312 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.52■□□□□ 0.56
LSM6P62312 AC005229.4-201ENST00000610085 2198 ntBASIC18.52■□□□□ 0.56
LSM6P62312 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.52■□□□□ 0.56
LSM6P62312 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 SLC25A24-204ENST00000569674 2357 ntBASIC18.52■□□□□ 0.56
LSM6P62312 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LSM6P62312 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 AC027612.3-201ENST00000413684 1047 ntBASIC18.52■□□□□ 0.56
LSM6P62312 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.52■□□□□ 0.56
LSM6P62312 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM6P62312 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.52■□□□□ 0.56
LSM6P62312 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
LSM6P62312 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LSM6P62312 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.51■□□□□ 0.55
LSM6P62312 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.51■□□□□ 0.55
LSM6P62312 AC053503.5-201ENST00000601508 636 ntBASIC18.51■□□□□ 0.55
LSM6P62312 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM6P62312 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM6P62312 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM6P62312 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM6P62312 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LSM6P62312 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM6P62312 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.5■□□□□ 0.55
LSM6P62312 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.5■□□□□ 0.55
LSM6P62312 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LSM6P62312 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM6P62312 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LSM6P62312 EEF1DP3-203ENST00000566025 782 ntBASIC18.5■□□□□ 0.55
LSM6P62312 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM6P62312 MIR6084-201ENST00000622012 110 ntBASIC18.5■□□□□ 0.55
LSM6P62312 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.5■□□□□ 0.55
LSM6P62312 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM6P62312 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LSM6P62312 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM6P62312 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.5■□□□□ 0.55
LSM6P62312 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM6P62312 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.49■□□□□ 0.55
LSM6P62312 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.49■□□□□ 0.55
LSM6P62312 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 AL049796.1-201ENST00000565336 1766 ntBASIC18.49■□□□□ 0.55
LSM6P62312 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM6P62312 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LSM6P62312 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.48■□□□□ 0.55
LSM6P62312 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.48■□□□□ 0.55
LSM6P62312 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.48■□□□□ 0.55
LSM6P62312 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.48■□□□□ 0.55
LSM6P62312 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LSM6P62312 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM6P62312 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.48■□□□□ 0.55
LSM6P62312 AF106564.1-201ENST00000607058 2553 ntBASIC18.47■□□□□ 0.55
LSM6P62312 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM6P62312 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM6P62312 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM6P62312 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LSM6P62312 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM6P62312 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM6P62312 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM6P62312 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM6P62312 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms