Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATP6V0CP27449 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0CP27449 AC139795.1-202ENST00000500444 432 ntBASIC16.86■□□□□ 0.29
ATP6V0CP27449 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0CP27449 AC005703.6-201ENST00000623265 1329 ntBASIC16.86■□□□□ 0.29
ATP6V0CP27449 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0CP27449 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0CP27449 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6V0CP27449 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ATP6V0CP27449 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6V0CP27449 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 OR7E47P-201ENST00000546390 1422 ntBASIC16.84■□□□□ 0.29
ATP6V0CP27449 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6V0CP27449 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP6V0CP27449 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.83■□□□□ 0.29
ATP6V0CP27449 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0CP27449 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0CP27449 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6V0CP27449 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATP6V0CP27449 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP6V0CP27449 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0CP27449 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0CP27449 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP6V0CP27449 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.83■□□□□ 0.28
ATP6V0CP27449 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0CP27449 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP6V0CP27449 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP6V0CP27449 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0CP27449 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP6V0CP27449 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 PLK5-205ENST00000642079 1969 ntBASIC16.82■□□□□ 0.28
ATP6V0CP27449 AC027702.1-201ENST00000563810 1770 ntBASIC16.82■□□□□ 0.28
ATP6V0CP27449 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATP6V0CP27449 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP6V0CP27449 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP6V0CP27449 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0CP27449 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0CP27449 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0CP27449 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0CP27449 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0CP27449 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0CP27449 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP6V0CP27449 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP6V0CP27449 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP6V0CP27449 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0CP27449 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP6V0CP27449 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP6V0CP27449 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms