Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19■□□□□ 0.63
SSX4O60224 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19■□□□□ 0.63
SSX4O60224 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SSX4O60224 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.99■□□□□ 0.63
SSX4O60224 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX4O60224 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX4O60224 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX4O60224 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX4O60224 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX4O60224 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SSX4O60224 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX4O60224 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX4O60224 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SSX4O60224 AC244015.2-201ENST00000616358 1861 ntBASIC18.99■□□□□ 0.63
SSX4O60224 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX4O60224 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSX4O60224 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX4O60224 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.98■□□□□ 0.63
SSX4O60224 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX4O60224 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSX4O60224 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSX4O60224 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.98■□□□□ 0.63
SSX4O60224 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.98■□□□□ 0.63
SSX4O60224 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX4O60224 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX4O60224 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.98■□□□□ 0.63
SSX4O60224 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.98■□□□□ 0.63
SSX4O60224 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SSX4O60224 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.98■□□□□ 0.63
SSX4O60224 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.98■□□□□ 0.63
SSX4O60224 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX4O60224 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX4O60224 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX4O60224 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX4O60224 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX4O60224 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.97■□□□□ 0.63
SSX4O60224 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX4O60224 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX4O60224 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX4O60224 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX4O60224 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SSX4O60224 TSPY26P-201ENST00000476365 1326 ntBASIC18.97■□□□□ 0.63
SSX4O60224 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX4O60224 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX4O60224 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX4O60224 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.96■□□□□ 0.63
SSX4O60224 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SSX4O60224 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.96■□□□□ 0.63
SSX4O60224 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.96■□□□□ 0.63
SSX4O60224 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.96■□□□□ 0.63
SSX4O60224 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SSX4O60224 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.96■□□□□ 0.63
SSX4O60224 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX4O60224 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX4O60224 FEM1AP4-201ENST00000443167 1987 ntBASIC18.95■□□□□ 0.62
SSX4O60224 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX4O60224 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SSX4O60224 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SSX4O60224 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX4O60224 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX4O60224 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX4O60224 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX4O60224 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX4O60224 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.95■□□□□ 0.62
SSX4O60224 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX4O60224 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX4O60224 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SSX4O60224 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX4O60224 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX4O60224 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX4O60224 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SSX4O60224 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX4O60224 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SSX4O60224 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SSX4O60224 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX4O60224 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSX4O60224 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX4O60224 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX4O60224 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX4O60224 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX4O60224 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SSX4O60224 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.94■□□□□ 0.62
SSX4O60224 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SSX4O60224 SLC47A1P1-202ENST00000449666 945 ntBASIC18.94■□□□□ 0.62
SSX4O60224 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX4O60224 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms