Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 AC105265.2-201ENST00000467189 838 ntBASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 AL358852.1-201ENST00000623174 1268 ntBASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHBDF1Q96CC6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 TPRG1LP1-201ENST00000598702 760 ntBASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.59■□□□□ 0.89
RHBDF1Q96CC6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.58■□□□□ 0.89
RHBDF1Q96CC6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RHBDF1Q96CC6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RHBDF1Q96CC6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.58■□□□□ 0.88
RHBDF1Q96CC6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.58■□□□□ 0.88
RHBDF1Q96CC6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 IRS3P-201ENST00000223076 1006 ntBASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RHBDF1Q96CC6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 MIR6084-201ENST00000622012 110 ntBASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHBDF1Q96CC6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.55■□□□□ 0.88
RHBDF1Q96CC6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHBDF1Q96CC6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms